Gene : Glyma.10G172200 G. max Wm82.a2.v1
Defline:  (1 of 5) 2.4.1.242 - NDP-glucose--starch glucosyltransferase / Waxy protein Genomic Order:  1722
Name:  ? Glyma.10G172200 Secondary Identifier:  ? PAC:30475442
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-622 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G172200 0.5kb upstream 0.5kb upstream 5631 true Chr10: 40580556-40586186 Glycine max
Glyma.10G172200 0.5kb upstream 0.5kb upstream 500 false Chr10: 40580556-40581055 Glycine max
Glyma.10G172200 0.5kb downstream 0.5kb downstream 5631 true Chr10: 40581056-40586686 Glycine max
Glyma.10G172200 0.5kb downstream 0.5kb downstream 500 false Chr10: 40586187-40586686 Glycine max
Glyma.10G172200 1.0kb upstream 1.0kb upstream 6131 true Chr10: 40580056-40586186 Glycine max
Glyma.10G172200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 40580056-40581055 Glycine max
Glyma.10G172200 1.0kb downstream 1.0kb downstream 6131 true Chr10: 40581056-40587186 Glycine max
Glyma.10G172200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40586187-40587186 Glycine max
Glyma.10G172200 2.0kb upstream 2.0kb upstream 7131 true Chr10: 40579056-40586186 Glycine max
Glyma.10G172200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 40579056-40581055 Glycine max
Glyma.10G172200 2.0kb downstream 2.0kb downstream 7131 true Chr10: 40581056-40588186 Glycine max
Glyma.10G172200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 40586187-40588186 Glycine max
Glyma.10G172200 5.0kb upstream 5.0kb upstream 10131 true Chr10: 40576056-40586186 Glycine max
Glyma.10G172200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 40576056-40581055 Glycine max
Glyma.10G172200 5.0kb downstream 5.0kb downstream 10131 true Chr10: 40581056-40591186 Glycine max
Glyma.10G172200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 40586187-40591186 Glycine max
Glyma.10G172200 10.0kb upstream 10.0kb upstream 15131 true Chr10: 40571056-40586186 Glycine max
Glyma.10G172200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 40571056-40581055 Glycine max
Glyma.10G172200 10.0kb downstream 10.0kb downstream 15131 true Chr10: 40581056-40596186 Glycine max
Glyma.10G172200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 40586187-40596186 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311550 5265 Fabidae View MSA
124071103 5270 Rosid View MSA
123740626 5271 Pentapetalae View MSA
122790728 5272 Eudicot View MSA
122042612 5273 Angiosperm View MSA
121345518 5274 Embryophyte View MSA
123424723 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.232406 0.0 1.17725   Low
cufflinks 2.77941 0.0 10.3535    
cufflinks 1.25169 0.0 5.92484    
cufflinks 6.77833 0.0 23.8605    
cufflinks 29.4594 0.0 122.245 High High
cufflinks 3.6882 0.0 14.639    
cufflinks 109.495 0.0 764.705 High High
cufflinks 0.691279 0.0 4.56704    
cufflinks 2.52587 0.0 11.1702    
cufflinks 0.155        
cufflinks 0.049     Low  
cufflinks 0.492        
cufflinks 2.547       High
cufflinks 5.261       High
cufflinks 0.001     Low Low
cufflinks 0.018     Low  
cufflinks 0.121        
cufflinks 0.978       High
cufflinks 0.474        
cufflinks 0.015     Low  
cufflinks 0.061     Low  
cufflinks 0.012     Low  
cufflinks 0.017     Low  
cufflinks 0.02     Low  
cufflinks 0.004     Low Low
cufflinks 0.246        

0 Strain