Gene : Glyma.10G159800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10314:SF97 - BIFUNCTIONAL L-3-CYANOALANINE SYNTHASE/CYSTEINE SYNTHASE D1-RELATED Genomic Order:  1598
Name:  ? Glyma.10G159800 Secondary Identifier:  ? PAC:30477758
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax CYSTSYN-PWY Glycine max pathologic  
Gmax PWY-6936 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G159800 0.5kb upstream 0.5kb upstream 5935 true Chr10: 39411242-39417176 Glycine max
Glyma.10G159800 0.5kb upstream 0.5kb upstream 500 false Chr10: 39416677-39417176 Glycine max
Glyma.10G159800 0.5kb downstream 0.5kb downstream 5935 true Chr10: 39410742-39416676 Glycine max
Glyma.10G159800 0.5kb downstream 0.5kb downstream 500 false Chr10: 39410742-39411241 Glycine max
Glyma.10G159800 1.0kb upstream 1.0kb upstream 6435 true Chr10: 39411242-39417676 Glycine max
Glyma.10G159800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 39416677-39417676 Glycine max
Glyma.10G159800 1.0kb downstream 1.0kb downstream 6435 true Chr10: 39410242-39416676 Glycine max
Glyma.10G159800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 39410242-39411241 Glycine max
Glyma.10G159800 2.0kb upstream 2.0kb upstream 7435 true Chr10: 39411242-39418676 Glycine max
Glyma.10G159800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 39416677-39418676 Glycine max
Glyma.10G159800 2.0kb downstream 2.0kb downstream 7435 true Chr10: 39409242-39416676 Glycine max
Glyma.10G159800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 39409242-39411241 Glycine max
Glyma.10G159800 5.0kb upstream 5.0kb upstream 10435 true Chr10: 39411242-39421676 Glycine max
Glyma.10G159800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 39416677-39421676 Glycine max
Glyma.10G159800 5.0kb downstream 5.0kb downstream 10435 true Chr10: 39406242-39416676 Glycine max
Glyma.10G159800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 39406242-39411241 Glycine max
Glyma.10G159800 10.0kb upstream 10.0kb upstream 15435 true Chr10: 39411242-39426676 Glycine max
Glyma.10G159800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 39416677-39426676 Glycine max
Glyma.10G159800 10.0kb downstream 10.0kb downstream 15435 true Chr10: 39401242-39416676 Glycine max
Glyma.10G159800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 39401242-39411241 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314566 5265 Fabidae View MSA
124069374 5270 Rosid View MSA
123750353 5271 Pentapetalae View MSA
122787082 5272 Eudicot View MSA
122044204 5273 Angiosperm View MSA
121350970 5274 Embryophyte View MSA
123424805 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.8046 0.0 139.55 High High
cufflinks 14.9068 0.0 66.7088    
cufflinks 11.5484 0.0 57.3034    
cufflinks 14.3202 0.0 71.7984    
cufflinks 12.759 0.0 57.4521    
cufflinks 5.88775 0.0 27.5548   Low
cufflinks 10.2648 0.0 52.6412    
cufflinks 14.5824 0.0 71.4947    
cufflinks 30.0973 0.0 141.383 High High
cufflinks 0.522        
cufflinks 0.587        
cufflinks 0.55        
cufflinks 0.39        
cufflinks 0.156       Low
cufflinks 2.053       High
cufflinks 0.931        
cufflinks 0.695        
cufflinks 0.411        
cufflinks 0.623        
cufflinks 0.673        
cufflinks 0.556        
cufflinks 0.897        
cufflinks 0.798        
cufflinks 0.679        
cufflinks 0.76        
cufflinks 0.611        

0 Strain