Gene : Glyma.10G160800 G. max Wm82.a2.v1
Defline:  (1 of 3) PF00036//PF13202 - EF hand (EF-hand_1) // EF hand (EF-hand_5) Genomic Order:  1608
Name:  ? Glyma.10G160800 Secondary Identifier:  ? PAC:30477962
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G160800 0.5kb upstream 0.5kb upstream 893 true Chr10: 39497701-39498593 Glycine max
Glyma.10G160800 0.5kb upstream 0.5kb upstream 500 false Chr10: 39498094-39498593 Glycine max
Glyma.10G160800 0.5kb downstream 0.5kb downstream 893 true Chr10: 39497201-39498093 Glycine max
Glyma.10G160800 0.5kb downstream 0.5kb downstream 500 false Chr10: 39497201-39497700 Glycine max
Glyma.10G160800 1.0kb upstream 1.0kb upstream 1393 true Chr10: 39497701-39499093 Glycine max
Glyma.10G160800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 39498094-39499093 Glycine max
Glyma.10G160800 1.0kb downstream 1.0kb downstream 1393 true Chr10: 39496701-39498093 Glycine max
Glyma.10G160800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 39496701-39497700 Glycine max
Glyma.10G160800 2.0kb upstream 2.0kb upstream 2393 true Chr10: 39497701-39500093 Glycine max
Glyma.10G160800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 39498094-39500093 Glycine max
Glyma.10G160800 2.0kb downstream 2.0kb downstream 2393 true Chr10: 39495701-39498093 Glycine max
Glyma.10G160800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 39495701-39497700 Glycine max
Glyma.10G160800 5.0kb upstream 5.0kb upstream 5393 true Chr10: 39497701-39503093 Glycine max
Glyma.10G160800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 39498094-39503093 Glycine max
Glyma.10G160800 5.0kb downstream 5.0kb downstream 5393 true Chr10: 39492701-39498093 Glycine max
Glyma.10G160800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 39492701-39497700 Glycine max
Glyma.10G160800 10.0kb upstream 10.0kb upstream 10393 true Chr10: 39497701-39508093 Glycine max
Glyma.10G160800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 39498094-39508093 Glycine max
Glyma.10G160800 10.0kb downstream 10.0kb downstream 10393 true Chr10: 39487701-39498093 Glycine max
Glyma.10G160800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 39487701-39497700 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791928 5273 Angiosperm View MSA
122299478 5265 Fabidae View MSA
124066269 5270 Rosid View MSA
123742296 5271 Pentapetalae View MSA
122795371 5272 Eudicot View MSA
121063196 5274 Embryophyte View MSA
123102965 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0876197 0.0 0.396262 Low Low
cufflinks 5.41756 0.0 19.512    
cufflinks 1.01055 0.0 3.94405    
cufflinks 0.599443 0.0 2.38514    
cufflinks 6.58762 0.0 23.2381    
cufflinks 8.00198 0.0 27.9884    
cufflinks 0.562471 0.0 2.23886    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.95075 0.0 21.2607    
cufflinks 0.036     Low Low
cufflinks 0.24        
cufflinks 1.235        
cufflinks 11.004     High High
cufflinks 15.588     High High
cufflinks 0.242        
cufflinks 0.274        
cufflinks 0.81        
cufflinks 10.808     High High
cufflinks 4.648       High
cufflinks 0.319        
cufflinks 0.463        
cufflinks 0.23        
cufflinks 0.39        
cufflinks 0.285        
cufflinks 0.209        
cufflinks 0.598        

0 Strain