Gene : Glyma.10G160900 G. max Wm82.a2.v1
Defline:  (1 of 31) PF05910 - Plant protein of unknown function (DUF868) (DUF868) Genomic Order:  1609
Name:  ? Glyma.10G160900 Secondary Identifier:  ? PAC:30475813
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G160900 0.5kb upstream 0.5kb upstream 2352 true Chr10: 39513767-39516118 Glycine max
Glyma.10G160900 0.5kb upstream 0.5kb upstream 500 false Chr10: 39513767-39514266 Glycine max
Glyma.10G160900 0.5kb downstream 0.5kb downstream 2352 true Chr10: 39514267-39516618 Glycine max
Glyma.10G160900 0.5kb downstream 0.5kb downstream 500 false Chr10: 39516119-39516618 Glycine max
Glyma.10G160900 1.0kb upstream 1.0kb upstream 2852 true Chr10: 39513267-39516118 Glycine max
Glyma.10G160900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 39513267-39514266 Glycine max
Glyma.10G160900 1.0kb downstream 1.0kb downstream 2852 true Chr10: 39514267-39517118 Glycine max
Glyma.10G160900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 39516119-39517118 Glycine max
Glyma.10G160900 2.0kb upstream 2.0kb upstream 3852 true Chr10: 39512267-39516118 Glycine max
Glyma.10G160900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 39512267-39514266 Glycine max
Glyma.10G160900 2.0kb downstream 2.0kb downstream 3852 true Chr10: 39514267-39518118 Glycine max
Glyma.10G160900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 39516119-39518118 Glycine max
Glyma.10G160900 5.0kb upstream 5.0kb upstream 6852 true Chr10: 39509267-39516118 Glycine max
Glyma.10G160900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 39509267-39514266 Glycine max
Glyma.10G160900 5.0kb downstream 5.0kb downstream 6852 true Chr10: 39514267-39521118 Glycine max
Glyma.10G160900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 39516119-39521118 Glycine max
Glyma.10G160900 10.0kb upstream 10.0kb upstream 11852 true Chr10: 39504267-39516118 Glycine max
Glyma.10G160900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 39504267-39514266 Glycine max
Glyma.10G160900 10.0kb downstream 10.0kb downstream 11852 true Chr10: 39514267-39526118 Glycine max
Glyma.10G160900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 39516119-39526118 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122241226 5265 Fabidae Singleton cluster - no MSA
124061811 5270 Rosid View MSA
123749881 5271 Pentapetalae View MSA
122794470 5272 Eudicot View MSA
122042584 5273 Angiosperm View MSA
121347178 5274 Embryophyte View MSA
123380504 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.64864 0.0 5.62763   Low
cufflinks 3.66365 0.0 11.2121    
cufflinks 1.61865 0.0 5.51707   Low
cufflinks 10.2435 0.0 27.9288    
cufflinks 8.5433 0.0 23.6675    
cufflinks 18.7098 0.0 49.9249   High
cufflinks 3.62948 0.0 11.1679    
cufflinks 8.1097 0.0 22.5108    
cufflinks 4.493 0.0 13.3615    
cufflinks 6.62        
cufflinks 0.301        
cufflinks 4.712        
cufflinks 7.284     High  
cufflinks 12.404     High High
cufflinks 0.02     Low Low
cufflinks 3.422        
cufflinks 0.847        
cufflinks 9.703     High  
cufflinks 3.187        
cufflinks 4.349        
cufflinks 0.21       Low
cufflinks 4.592        
cufflinks 4.602        
cufflinks 0.071       Low
cufflinks 3.873        
cufflinks 0.752        

0 Strain