Gene : Glyma.10G163400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31358:SF4 - PROTEIN WAVE-DAMPENED 2-RELATED Genomic Order:  1634
Name:  ? Glyma.10G163400 Secondary Identifier:  ? PAC:30476384
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G163400 0.5kb upstream 0.5kb upstream 4704 true Chr10: 39727331-39732034 Glycine max
Glyma.10G163400 0.5kb upstream 0.5kb upstream 500 false Chr10: 39731535-39732034 Glycine max
Glyma.10G163400 0.5kb downstream 0.5kb downstream 4704 true Chr10: 39726831-39731534 Glycine max
Glyma.10G163400 0.5kb downstream 0.5kb downstream 500 false Chr10: 39726831-39727330 Glycine max
Glyma.10G163400 1.0kb upstream 1.0kb upstream 5204 true Chr10: 39727331-39732534 Glycine max
Glyma.10G163400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 39731535-39732534 Glycine max
Glyma.10G163400 1.0kb downstream 1.0kb downstream 5204 true Chr10: 39726331-39731534 Glycine max
Glyma.10G163400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 39726331-39727330 Glycine max
Glyma.10G163400 2.0kb upstream 2.0kb upstream 6204 true Chr10: 39727331-39733534 Glycine max
Glyma.10G163400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 39731535-39733534 Glycine max
Glyma.10G163400 2.0kb downstream 2.0kb downstream 6204 true Chr10: 39725331-39731534 Glycine max
Glyma.10G163400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 39725331-39727330 Glycine max
Glyma.10G163400 5.0kb upstream 5.0kb upstream 9204 true Chr10: 39727331-39736534 Glycine max
Glyma.10G163400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 39731535-39736534 Glycine max
Glyma.10G163400 5.0kb downstream 5.0kb downstream 9204 true Chr10: 39722331-39731534 Glycine max
Glyma.10G163400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 39722331-39727330 Glycine max
Glyma.10G163400 10.0kb upstream 10.0kb upstream 14204 true Chr10: 39727331-39741534 Glycine max
Glyma.10G163400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 39731535-39741534 Glycine max
Glyma.10G163400 10.0kb downstream 10.0kb downstream 14204 true Chr10: 39717331-39731534 Glycine max
Glyma.10G163400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 39717331-39727330 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301422 5265 Fabidae View MSA
124062203 5270 Rosid View MSA
123749584 5271 Pentapetalae View MSA
122790813 5272 Eudicot View MSA
122045686 5273 Angiosperm View MSA
121351484 5274 Embryophyte View MSA
123382183 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.03468 0.0 4.37425   Low
cufflinks 18.4737 0.0 62.9493    
cufflinks 4.26795 0.0 17.7876    
cufflinks 32.3314 0.0 118.098 High High
cufflinks 8.80601 0.0 31.1841    
cufflinks 13.6582 0.0 46.2181    
cufflinks 31.3964 0.0 113.711 High  
cufflinks 22.1766 0.0 76.8087 High  
cufflinks 7.74081 0.0 28.0674    
cufflinks 4.517       High
cufflinks 0.992       Low
cufflinks 3.36        
cufflinks 2.528        
cufflinks 2.658        
cufflinks 0.769       Low
cufflinks 3.525        
cufflinks 1.715        
cufflinks 3.451        
cufflinks 5.62       High
cufflinks 3.328        
cufflinks 1.296        
cufflinks 3.115        
cufflinks 3.723        
cufflinks 0.746       Low
cufflinks 3.696        
cufflinks 1.651        

0 Strain