Gene : Glyma.10G163700 G. max Wm82.a2.v1
Defline:  (1 of 2) 4.1.1.21 - Phosphoribosylaminoimidazole carboxylase / AIR carboxylase Genomic Order:  1637
Name:  ? Glyma.10G163700 Secondary Identifier:  ? PAC:30476195
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6124 Glycine max pathologic  
Gmax PWY-841 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G163700 0.5kb upstream 0.5kb upstream 8059 true Chr10: 39759858-39767916 Glycine max
Glyma.10G163700 0.5kb upstream 0.5kb upstream 500 false Chr10: 39759858-39760357 Glycine max
Glyma.10G163700 0.5kb downstream 0.5kb downstream 8059 true Chr10: 39760358-39768416 Glycine max
Glyma.10G163700 0.5kb downstream 0.5kb downstream 500 false Chr10: 39767917-39768416 Glycine max
Glyma.10G163700 1.0kb upstream 1.0kb upstream 8559 true Chr10: 39759358-39767916 Glycine max
Glyma.10G163700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 39759358-39760357 Glycine max
Glyma.10G163700 1.0kb downstream 1.0kb downstream 8559 true Chr10: 39760358-39768916 Glycine max
Glyma.10G163700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 39767917-39768916 Glycine max
Glyma.10G163700 2.0kb upstream 2.0kb upstream 9559 true Chr10: 39758358-39767916 Glycine max
Glyma.10G163700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 39758358-39760357 Glycine max
Glyma.10G163700 2.0kb downstream 2.0kb downstream 9559 true Chr10: 39760358-39769916 Glycine max
Glyma.10G163700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 39767917-39769916 Glycine max
Glyma.10G163700 5.0kb upstream 5.0kb upstream 12559 true Chr10: 39755358-39767916 Glycine max
Glyma.10G163700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 39755358-39760357 Glycine max
Glyma.10G163700 5.0kb downstream 5.0kb downstream 12559 true Chr10: 39760358-39772916 Glycine max
Glyma.10G163700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 39767917-39772916 Glycine max
Glyma.10G163700 10.0kb upstream 10.0kb upstream 17559 true Chr10: 39750358-39767916 Glycine max
Glyma.10G163700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 39750358-39760357 Glycine max
Glyma.10G163700 10.0kb downstream 10.0kb downstream 17559 true Chr10: 39760358-39777916 Glycine max
Glyma.10G163700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 39767917-39777916 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308610 5265 Fabidae View MSA
124064893 5270 Rosid View MSA
123748384 5271 Pentapetalae View MSA
122790389 5272 Eudicot View MSA
122043847 5273 Angiosperm View MSA
121345366 5274 Embryophyte View MSA
123425127 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.50882 0.0 29.4848    
cufflinks 6.8441 0.0 24.5558    
cufflinks 5.96659 0.0 24.1008    
cufflinks 3.84028 0.0 15.4574    
cufflinks 7.5753 0.0 29.6707    
cufflinks 3.15752 0.0 13.6782    
cufflinks 2.88148 0.0 10.8761   Low
cufflinks 3.78123 0.0 17.3566    
cufflinks 17.9507 0.0 68.9446   High
cufflinks 0.393        
cufflinks 0.194       Low
cufflinks 0.63        
cufflinks 0.757        
cufflinks 0.772        
cufflinks 2.632       High
cufflinks 0.705        
cufflinks 0.817        
cufflinks 0.735        
cufflinks 1.001        
cufflinks 0.688        
cufflinks 0.311       Low
cufflinks 0.788        
cufflinks 0.907        
cufflinks 0.244       Low
cufflinks 0.719        
cufflinks 0.618        

0 Strain