Gene : Glyma.10G153900 G. max Wm82.a2.v1
Defline:  (1 of 35) 1.13.11.58 - Linoleate 9S-lipoxygenase / Linoleate 9-lipoxygenase Genomic Order:  1539
Name:  ? Glyma.10G153900 Secondary Identifier:  ? PAC:30476188
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5406 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G153900 0.5kb upstream 0.5kb upstream 6751 true Chr10: 38898358-38905108 Glycine max
Glyma.10G153900 0.5kb upstream 0.5kb upstream 500 false Chr10: 38904609-38905108 Glycine max
Glyma.10G153900 0.5kb downstream 0.5kb downstream 6751 true Chr10: 38897858-38904608 Glycine max
Glyma.10G153900 0.5kb downstream 0.5kb downstream 500 false Chr10: 38897858-38898357 Glycine max
Glyma.10G153900 1.0kb upstream 1.0kb upstream 7251 true Chr10: 38898358-38905608 Glycine max
Glyma.10G153900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 38904609-38905608 Glycine max
Glyma.10G153900 1.0kb downstream 1.0kb downstream 7251 true Chr10: 38897358-38904608 Glycine max
Glyma.10G153900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 38897358-38898357 Glycine max
Glyma.10G153900 2.0kb upstream 2.0kb upstream 8251 true Chr10: 38898358-38906608 Glycine max
Glyma.10G153900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 38904609-38906608 Glycine max
Glyma.10G153900 2.0kb downstream 2.0kb downstream 8251 true Chr10: 38896358-38904608 Glycine max
Glyma.10G153900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 38896358-38898357 Glycine max
Glyma.10G153900 5.0kb upstream 5.0kb upstream 11251 true Chr10: 38898358-38909608 Glycine max
Glyma.10G153900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 38904609-38909608 Glycine max
Glyma.10G153900 5.0kb downstream 5.0kb downstream 11251 true Chr10: 38893358-38904608 Glycine max
Glyma.10G153900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 38893358-38898357 Glycine max
Glyma.10G153900 10.0kb upstream 10.0kb upstream 16251 true Chr10: 38898358-38914608 Glycine max
Glyma.10G153900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 38904609-38914608 Glycine max
Glyma.10G153900 10.0kb downstream 10.0kb downstream 16251 true Chr10: 38888358-38904608 Glycine max
Glyma.10G153900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 38888358-38898357 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122793975 5272 Eudicot View MSA
122297154 5265 Fabidae View MSA
124071703 5270 Rosid View MSA
123743828 5271 Pentapetalae View MSA
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.9584 0.0 81.4    
cufflinks 1.55139 0.0 5.15192   Low
cufflinks 7.03461 0.0 21.2348    
cufflinks 24.1058 0.0 91.5633 High High
cufflinks 5.07266 0.0 15.9531    
cufflinks 1.05148 0.0 3.8033   Low
cufflinks 36.1958 0.0 151.769 High High
cufflinks 5.2697 0.0 16.3946    
cufflinks 5.21721 0.0 18.9193    
cufflinks 2.294        
cufflinks 2.999        
cufflinks 2.969        
cufflinks 1.012        
cufflinks 0.928        
cufflinks 0.72       Low
cufflinks 1.34        
cufflinks 1.954        
cufflinks 3.371        
cufflinks 0.57       Low
cufflinks 1.038        
cufflinks 4.176       High
cufflinks 2.351        
cufflinks 1.184        
cufflinks 3.775       High
cufflinks 1.032        
cufflinks 7.64     High High

0 Strain