Gene : Glyma.10G157100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR30373:SF2 - UPF0603 PROTEIN YGCG Genomic Order:  1571
Name:  ? Glyma.10G157100 Secondary Identifier:  ? PAC:30475513
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5083 Glycine max pathologic  
Gmax PWY-6348 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G157100 0.5kb upstream 0.5kb upstream 3142 true Chr10: 39139307-39142448 Glycine max
Glyma.10G157100 0.5kb upstream 0.5kb upstream 500 false Chr10: 39139307-39139806 Glycine max
Glyma.10G157100 0.5kb downstream 0.5kb downstream 3142 true Chr10: 39139807-39142948 Glycine max
Glyma.10G157100 0.5kb downstream 0.5kb downstream 500 false Chr10: 39142449-39142948 Glycine max
Glyma.10G157100 1.0kb upstream 1.0kb upstream 3642 true Chr10: 39138807-39142448 Glycine max
Glyma.10G157100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 39138807-39139806 Glycine max
Glyma.10G157100 1.0kb downstream 1.0kb downstream 3642 true Chr10: 39139807-39143448 Glycine max
Glyma.10G157100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 39142449-39143448 Glycine max
Glyma.10G157100 2.0kb upstream 2.0kb upstream 4642 true Chr10: 39137807-39142448 Glycine max
Glyma.10G157100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 39137807-39139806 Glycine max
Glyma.10G157100 2.0kb downstream 2.0kb downstream 4642 true Chr10: 39139807-39144448 Glycine max
Glyma.10G157100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 39142449-39144448 Glycine max
Glyma.10G157100 5.0kb upstream 5.0kb upstream 7642 true Chr10: 39134807-39142448 Glycine max
Glyma.10G157100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 39134807-39139806 Glycine max
Glyma.10G157100 5.0kb downstream 5.0kb downstream 7642 true Chr10: 39139807-39147448 Glycine max
Glyma.10G157100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 39142449-39147448 Glycine max
Glyma.10G157100 10.0kb upstream 10.0kb upstream 12642 true Chr10: 39129807-39142448 Glycine max
Glyma.10G157100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 39129807-39139806 Glycine max
Glyma.10G157100 10.0kb downstream 10.0kb downstream 12642 true Chr10: 39139807-39152448 Glycine max
Glyma.10G157100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 39142449-39152448 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300908 5265 Fabidae View MSA
124061871 5270 Rosid View MSA
123737495 5271 Pentapetalae View MSA
122787639 5272 Eudicot View MSA
122046154 5273 Angiosperm View MSA
121349050 5274 Embryophyte View MSA
123424307 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 68.5107 0.0 193.951 High High
cufflinks 54.0307 0.0 149.475 High High
cufflinks 9.42919 0.0 26.2329    
cufflinks 28.274 0.0 75.5607 High  
cufflinks 6.40756 0.0 18.6525    
cufflinks 3.74956 0.0 11.7406   Low
cufflinks 41.0509 0.0 111.145 High  
cufflinks 24.2284 0.0 64.6448 High  
cufflinks 2.28244 0.0 7.63962   Low
cufflinks 20.523     High  
cufflinks 0.293        
cufflinks 10.34     High  
cufflinks 0.172       Low
cufflinks 0.143       Low
cufflinks 0.504        
cufflinks 69.541     High High
cufflinks 0.091       Low
cufflinks 14.033     High  
cufflinks 26.963     High  
cufflinks 82.991     High High
cufflinks 0.193        
cufflinks 78.46     High High
cufflinks 52.787     High High
cufflinks 0.173       Low
cufflinks 77.783     High High
cufflinks 0.143       Low

0 Strain