Gene : Glyma.10G158000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23024:SF227 - GIBBERELLIN RECEPTOR GID1A-RELATED Genomic Order:  1580
Name:  ? Glyma.10G158000 Secondary Identifier:  ? PAC:30475133
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6303 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G158000 0.5kb upstream 0.5kb upstream 3234 true Chr10: 39204866-39208099 Glycine max
Glyma.10G158000 0.5kb upstream 0.5kb upstream 500 false Chr10: 39207600-39208099 Glycine max
Glyma.10G158000 0.5kb downstream 0.5kb downstream 3234 true Chr10: 39204366-39207599 Glycine max
Glyma.10G158000 0.5kb downstream 0.5kb downstream 500 false Chr10: 39204366-39204865 Glycine max
Glyma.10G158000 1.0kb upstream 1.0kb upstream 3734 true Chr10: 39204866-39208599 Glycine max
Glyma.10G158000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 39207600-39208599 Glycine max
Glyma.10G158000 1.0kb downstream 1.0kb downstream 3734 true Chr10: 39203866-39207599 Glycine max
Glyma.10G158000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 39203866-39204865 Glycine max
Glyma.10G158000 2.0kb upstream 2.0kb upstream 4734 true Chr10: 39204866-39209599 Glycine max
Glyma.10G158000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 39207600-39209599 Glycine max
Glyma.10G158000 2.0kb downstream 2.0kb downstream 4734 true Chr10: 39202866-39207599 Glycine max
Glyma.10G158000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 39202866-39204865 Glycine max
Glyma.10G158000 5.0kb upstream 5.0kb upstream 7734 true Chr10: 39204866-39212599 Glycine max
Glyma.10G158000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 39207600-39212599 Glycine max
Glyma.10G158000 5.0kb downstream 5.0kb downstream 7734 true Chr10: 39199866-39207599 Glycine max
Glyma.10G158000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 39199866-39204865 Glycine max
Glyma.10G158000 10.0kb upstream 10.0kb upstream 12734 true Chr10: 39204866-39217599 Glycine max
Glyma.10G158000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 39207600-39217599 Glycine max
Glyma.10G158000 10.0kb downstream 10.0kb downstream 12734 true Chr10: 39194866-39207599 Glycine max
Glyma.10G158000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 39194866-39204865 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306678 5265 Fabidae View MSA
124068362 5270 Rosid View MSA
123741426 5271 Pentapetalae View MSA
122795616 5272 Eudicot View MSA
122044098 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350684 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.7972 0.0 51.2613    
cufflinks 21.3711 0.0 74.6594 High High
cufflinks 12.9838 0.0 45.0316    
cufflinks 13.4774 0.0 46.7645    
cufflinks 18.2973 0.0 63.3404    
cufflinks 11.0126 0.0 38.5657   Low
cufflinks 8.88862 0.0 32.6275   Low
cufflinks 21.1449 0.0 73.4751 High High
cufflinks 19.2903 0.0 66.6735    
cufflinks 5.296        
cufflinks 0.681       Low
cufflinks 3.464        
cufflinks 7.336     High High
cufflinks 5.159        
cufflinks 1.963        
cufflinks 4.08        
cufflinks 2.162        
cufflinks 3.222        
cufflinks 8.875     High High
cufflinks 4.237        
cufflinks 0.642       Low
cufflinks 4.681        
cufflinks 4.253        
cufflinks 0.838       Low
cufflinks 3.795        
cufflinks 1.154       Low

0 Strain