Gene : Glyma.10G149700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10302:SF6 - SINGLE-STRANDED DNA-BINDING PROTEIN, MITOCHONDRIAL Genomic Order:  1497
Name:  ? Glyma.10G149700 Secondary Identifier:  ? PAC:30474351
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G149700 0.5kb upstream 0.5kb upstream 5194 true Chr10: 38516493-38521686 Glycine max
Glyma.10G149700 0.5kb upstream 0.5kb upstream 500 false Chr10: 38521187-38521686 Glycine max
Glyma.10G149700 0.5kb downstream 0.5kb downstream 5194 true Chr10: 38515993-38521186 Glycine max
Glyma.10G149700 0.5kb downstream 0.5kb downstream 500 false Chr10: 38515993-38516492 Glycine max
Glyma.10G149700 1.0kb upstream 1.0kb upstream 5694 true Chr10: 38516493-38522186 Glycine max
Glyma.10G149700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 38521187-38522186 Glycine max
Glyma.10G149700 1.0kb downstream 1.0kb downstream 5694 true Chr10: 38515493-38521186 Glycine max
Glyma.10G149700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 38515493-38516492 Glycine max
Glyma.10G149700 2.0kb upstream 2.0kb upstream 6694 true Chr10: 38516493-38523186 Glycine max
Glyma.10G149700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 38521187-38523186 Glycine max
Glyma.10G149700 2.0kb downstream 2.0kb downstream 6694 true Chr10: 38514493-38521186 Glycine max
Glyma.10G149700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 38514493-38516492 Glycine max
Glyma.10G149700 5.0kb upstream 5.0kb upstream 9694 true Chr10: 38516493-38526186 Glycine max
Glyma.10G149700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 38521187-38526186 Glycine max
Glyma.10G149700 5.0kb downstream 5.0kb downstream 9694 true Chr10: 38511493-38521186 Glycine max
Glyma.10G149700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 38511493-38516492 Glycine max
Glyma.10G149700 10.0kb upstream 10.0kb upstream 14694 true Chr10: 38516493-38531186 Glycine max
Glyma.10G149700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 38521187-38531186 Glycine max
Glyma.10G149700 10.0kb downstream 10.0kb downstream 14694 true Chr10: 38506493-38521186 Glycine max
Glyma.10G149700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 38506493-38516492 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300022 5265 Fabidae View MSA
124067311 5270 Rosid View MSA
123743137 5271 Pentapetalae View MSA
122790596 5272 Eudicot View MSA
122047632 5273 Angiosperm View MSA
121349645 5274 Embryophyte View MSA
123381385 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.87229 0.0 6.9555    
cufflinks 2.30052 0.0 7.91032    
cufflinks 1.75989 0.0 6.45915    
cufflinks 1.81963 0.0 6.76319    
cufflinks 3.13058 0.0 9.87899   High
cufflinks 2.00392 0.0 7.1967    
cufflinks 3.46157 0.0 10.5791   High
cufflinks 1.72121 0.0 6.35264    
cufflinks 3.06653 0.0 9.5642   High
cufflinks 0.492        
cufflinks 0.251       Low
cufflinks 0.8        
cufflinks 1.536       High
cufflinks 2.157       High
cufflinks 0.39        
cufflinks 0.826        
cufflinks 0.479        
cufflinks 0.936        
cufflinks 1.151        
cufflinks 0.689        
cufflinks 0.368       Low
cufflinks 0.746        
cufflinks 0.976        
cufflinks 0.366       Low
cufflinks 0.642        
cufflinks 0.395        

0 Strain