Gene : Glyma.10G152700 G. max Wm82.a2.v1

Defline:  (1 of 5) PTHR10688 - PWWP DOMAIN-CONTAINING PROTEIN Genomic Order:  1527
Name:  ? Glyma.10G152700 Secondary Identifier:  ? PAC:30475743

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G152700 0.5kb upstream 0.5kb upstream 4944 true Chr10: 38733208-38738151 Glycine max
Glyma.10G152700 0.5kb upstream 0.5kb upstream 500 false Chr10: 38737652-38738151 Glycine max
Glyma.10G152700 0.5kb downstream 0.5kb downstream 4944 true Chr10: 38732708-38737651 Glycine max
Glyma.10G152700 0.5kb downstream 0.5kb downstream 500 false Chr10: 38732708-38733207 Glycine max
Glyma.10G152700 1.0kb upstream 1.0kb upstream 5444 true Chr10: 38733208-38738651 Glycine max
Glyma.10G152700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 38737652-38738651 Glycine max
Glyma.10G152700 1.0kb downstream 1.0kb downstream 5444 true Chr10: 38732208-38737651 Glycine max
Glyma.10G152700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 38732208-38733207 Glycine max
Glyma.10G152700 2.0kb upstream 2.0kb upstream 6444 true Chr10: 38733208-38739651 Glycine max
Glyma.10G152700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 38737652-38739651 Glycine max
Glyma.10G152700 2.0kb downstream 2.0kb downstream 6444 true Chr10: 38731208-38737651 Glycine max
Glyma.10G152700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 38731208-38733207 Glycine max
Glyma.10G152700 5.0kb upstream 5.0kb upstream 9444 true Chr10: 38733208-38742651 Glycine max
Glyma.10G152700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 38737652-38742651 Glycine max
Glyma.10G152700 5.0kb downstream 5.0kb downstream 9444 true Chr10: 38728208-38737651 Glycine max
Glyma.10G152700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 38728208-38733207 Glycine max
Glyma.10G152700 10.0kb upstream 10.0kb upstream 14444 true Chr10: 38733208-38747651 Glycine max
Glyma.10G152700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 38737652-38747651 Glycine max
Glyma.10G152700 10.0kb downstream 10.0kb downstream 14444 true Chr10: 38723208-38737651 Glycine max
Glyma.10G152700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 38723208-38733207 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250719 5265 Fabidae View MSA
124067210 5270 Rosid View MSA
123749922 5271 Pentapetalae View MSA
122795074 5272 Eudicot View MSA
122049561 5273 Angiosperm View MSA
121311475 5274 Embryophyte View MSA
123348768 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.70027 0.0 12.6932    
cufflinks 3.64712 0.0 10.0201   Low
cufflinks 4.59593 0.0 12.4353    
cufflinks 4.86807 0.0 13.1282    
cufflinks 4.00753 0.0 10.9116    
cufflinks 3.55325 0.0 9.75946   Low
cufflinks 5.89686 0.0 15.7895   High
cufflinks 4.51129 0.0 12.2148    
cufflinks 4.42084 0.0 11.9788    
cufflinks 2.756        
cufflinks 2.588       Low
cufflinks 4.556        
cufflinks 2.533       Low
cufflinks 2.643       Low
cufflinks 2.694        
cufflinks 4.342        
cufflinks 4.525        
cufflinks 3.694        
cufflinks 4.68       High
cufflinks 4.596        
cufflinks 2.282       Low
cufflinks 4.682       High
cufflinks 4.363        
cufflinks 3.053        
cufflinks 4.505        
cufflinks 3.284        

0 Strain