Gene : Glyma.10G196600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31499:SF9 - MYB FAMILY TRANSCRIPTION FACTOR Genomic Order:  1966
Name:  ? Glyma.10G196600 Secondary Identifier:  ? PAC:30476286
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G196600 0.5kb upstream 0.5kb upstream 3869 true Chr10: 42801770-42805638 Glycine max
Glyma.10G196600 0.5kb upstream 0.5kb upstream 500 false Chr10: 42801770-42802269 Glycine max
Glyma.10G196600 0.5kb downstream 0.5kb downstream 3869 true Chr10: 42802270-42806138 Glycine max
Glyma.10G196600 0.5kb downstream 0.5kb downstream 500 false Chr10: 42805639-42806138 Glycine max
Glyma.10G196600 1.0kb upstream 1.0kb upstream 4369 true Chr10: 42801270-42805638 Glycine max
Glyma.10G196600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 42801270-42802269 Glycine max
Glyma.10G196600 1.0kb downstream 1.0kb downstream 4369 true Chr10: 42802270-42806638 Glycine max
Glyma.10G196600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 42805639-42806638 Glycine max
Glyma.10G196600 2.0kb upstream 2.0kb upstream 5369 true Chr10: 42800270-42805638 Glycine max
Glyma.10G196600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 42800270-42802269 Glycine max
Glyma.10G196600 2.0kb downstream 2.0kb downstream 5369 true Chr10: 42802270-42807638 Glycine max
Glyma.10G196600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 42805639-42807638 Glycine max
Glyma.10G196600 5.0kb upstream 5.0kb upstream 8369 true Chr10: 42797270-42805638 Glycine max
Glyma.10G196600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 42797270-42802269 Glycine max
Glyma.10G196600 5.0kb downstream 5.0kb downstream 8369 true Chr10: 42802270-42810638 Glycine max
Glyma.10G196600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 42805639-42810638 Glycine max
Glyma.10G196600 10.0kb upstream 10.0kb upstream 13369 true Chr10: 42792270-42805638 Glycine max
Glyma.10G196600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 42792270-42802269 Glycine max
Glyma.10G196600 10.0kb downstream 10.0kb downstream 13369 true Chr10: 42802270-42815638 Glycine max
Glyma.10G196600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 42805639-42815638 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255013 5265 Fabidae View MSA
124064391 5270 Rosid View MSA
123753630 5271 Pentapetalae View MSA
122795386 5272 Eudicot View MSA
122048998 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.84961 0.0 24.333    
cufflinks 20.9947 0.0 64.6887 High High
cufflinks 7.46011 0.0 26.3031    
cufflinks 12.3093 0.0 39.7377    
cufflinks 6.8693 0.0 24.3163    
cufflinks 6.35265 0.0 22.0796    
cufflinks 17.4789 0.0 52.1773   High
cufflinks 7.26065 0.0 24.2992    
cufflinks 7.17795 0.0 24.1502    
cufflinks 1.51        
cufflinks 0.484       Low
cufflinks 2.285        
cufflinks 1.378        
cufflinks 1.434        
cufflinks 0.656       Low
cufflinks 3.268        
cufflinks 0.922        
cufflinks 2.544        
cufflinks 4.345       High
cufflinks 2.186        
cufflinks 0.833        
cufflinks 2.493        
cufflinks 6.167       High
cufflinks 0.875        
cufflinks 2.415        
cufflinks 0.83        

0 Strain