Gene : Glyma.10G197500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31989:SF29 - F18K10.6 PROTEIN-RELATED Genomic Order:  1975
Name:  ? Glyma.10G197500 Secondary Identifier:  ? PAC:30474999
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G197500 0.5kb upstream 0.5kb upstream 6778 true Chr10: 42881831-42888608 Glycine max
Glyma.10G197500 0.5kb upstream 0.5kb upstream 500 false Chr10: 42881831-42882330 Glycine max
Glyma.10G197500 0.5kb downstream 0.5kb downstream 6778 true Chr10: 42882331-42889108 Glycine max
Glyma.10G197500 0.5kb downstream 0.5kb downstream 500 false Chr10: 42888609-42889108 Glycine max
Glyma.10G197500 1.0kb upstream 1.0kb upstream 7278 true Chr10: 42881331-42888608 Glycine max
Glyma.10G197500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 42881331-42882330 Glycine max
Glyma.10G197500 1.0kb downstream 1.0kb downstream 7278 true Chr10: 42882331-42889608 Glycine max
Glyma.10G197500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 42888609-42889608 Glycine max
Glyma.10G197500 2.0kb upstream 2.0kb upstream 8278 true Chr10: 42880331-42888608 Glycine max
Glyma.10G197500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 42880331-42882330 Glycine max
Glyma.10G197500 2.0kb downstream 2.0kb downstream 8278 true Chr10: 42882331-42890608 Glycine max
Glyma.10G197500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 42888609-42890608 Glycine max
Glyma.10G197500 5.0kb upstream 5.0kb upstream 11278 true Chr10: 42877331-42888608 Glycine max
Glyma.10G197500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 42877331-42882330 Glycine max
Glyma.10G197500 5.0kb downstream 5.0kb downstream 11278 true Chr10: 42882331-42893608 Glycine max
Glyma.10G197500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 42888609-42893608 Glycine max
Glyma.10G197500 10.0kb upstream 10.0kb upstream 16278 true Chr10: 42872331-42888608 Glycine max
Glyma.10G197500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 42872331-42882330 Glycine max
Glyma.10G197500 10.0kb downstream 10.0kb downstream 16278 true Chr10: 42882331-42898608 Glycine max
Glyma.10G197500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 42888609-42898608 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296933 5265 Fabidae View MSA
124061074 5270 Rosid View MSA
123751964 5271 Pentapetalae View MSA
122797283 5272 Eudicot View MSA
122049961 5273 Angiosperm View MSA
121350430 5274 Embryophyte View MSA
123381726 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.53166 0.0 20.6414    
cufflinks 13.2001 0.0 35.2791    
cufflinks 12.3727 0.0 33.1143    
cufflinks 13.6894 0.0 36.5517    
cufflinks 7.60086 0.0 20.7942    
cufflinks 3.2537 0.0 9.79886   Low
cufflinks 12.8418 0.0 34.3179    
cufflinks 10.631 0.0 28.5594    
cufflinks 7.88414 0.0 21.5314    
cufflinks 1.811        
cufflinks 1.838        
cufflinks 4.274       High
cufflinks 1.2       Low
cufflinks 1.35       Low
cufflinks 2.068        
cufflinks 2.548        
cufflinks 2.048        
cufflinks 3.178        
cufflinks 3.847       High
cufflinks 4.122       High
cufflinks 1.462       Low
cufflinks 3.13        
cufflinks 2.993        
cufflinks 1.682        
cufflinks 3.141        
cufflinks 1.38       Low

0 Strain