Gene : Glyma.10G188400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31100:SF3 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 19-RELATED Genomic Order:  1884
Name:  ? Glyma.10G188400 Secondary Identifier:  ? PAC:30477956
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G188400 0.5kb upstream 0.5kb upstream 1450 true Chr10: 42142805-42144254 Glycine max
Glyma.10G188400 0.5kb upstream 0.5kb upstream 500 false Chr10: 42142805-42143304 Glycine max
Glyma.10G188400 0.5kb downstream 0.5kb downstream 1450 true Chr10: 42143305-42144754 Glycine max
Glyma.10G188400 0.5kb downstream 0.5kb downstream 500 false Chr10: 42144255-42144754 Glycine max
Glyma.10G188400 1.0kb upstream 1.0kb upstream 1950 true Chr10: 42142305-42144254 Glycine max
Glyma.10G188400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 42142305-42143304 Glycine max
Glyma.10G188400 1.0kb downstream 1.0kb downstream 1950 true Chr10: 42143305-42145254 Glycine max
Glyma.10G188400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 42144255-42145254 Glycine max
Glyma.10G188400 2.0kb upstream 2.0kb upstream 2950 true Chr10: 42141305-42144254 Glycine max
Glyma.10G188400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 42141305-42143304 Glycine max
Glyma.10G188400 2.0kb downstream 2.0kb downstream 2950 true Chr10: 42143305-42146254 Glycine max
Glyma.10G188400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 42144255-42146254 Glycine max
Glyma.10G188400 5.0kb upstream 5.0kb upstream 5950 true Chr10: 42138305-42144254 Glycine max
Glyma.10G188400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 42138305-42143304 Glycine max
Glyma.10G188400 5.0kb downstream 5.0kb downstream 5950 true Chr10: 42143305-42149254 Glycine max
Glyma.10G188400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 42144255-42149254 Glycine max
Glyma.10G188400 10.0kb upstream 10.0kb upstream 10950 true Chr10: 42133305-42144254 Glycine max
Glyma.10G188400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 42133305-42143304 Glycine max
Glyma.10G188400 10.0kb downstream 10.0kb downstream 10950 true Chr10: 42143305-42154254 Glycine max
Glyma.10G188400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 42144255-42154254 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297655 5265 Fabidae View MSA
124071129 5270 Rosid View MSA
123751689 5271 Pentapetalae View MSA
122796160 5272 Eudicot View MSA
122048201 5273 Angiosperm View MSA
121348557 5274 Embryophyte View MSA
123380913 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0224489 0.0 0.101526 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0292602 0.0 0.129515 Low  
cufflinks 0.0367202 0.0 0.159056 Low  
cufflinks 18.5137 0.0 50.0851   High
cufflinks 4.44667 0.0 14.2382    
cufflinks 0.0563242 0.0 0.235187 Low  
cufflinks 0.0221547 0.0 0.100271 Low  
cufflinks 34.5068 0.0 92.0698 High High
cufflinks 0.015     Low Low
cufflinks 8.911     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 13.812     High  
cufflinks 7.703     High  
cufflinks 10.572     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 14.162     High  
cufflinks 0.016     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 13.559     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 17.6     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 19.066     High  

0 Strain