Gene : Glyma.10G188600 G. max Wm82.a2.v1
Defline:  (1 of 25) PF00917 - MATH domain (MATH) Genomic Order:  1886
Name:  ? Glyma.10G188600 Secondary Identifier:  ? PAC:30474505
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G188600 0.5kb upstream 0.5kb upstream 19047 true Chr10: 42181352-42200398 Glycine max
Glyma.10G188600 0.5kb upstream 0.5kb upstream 500 false Chr10: 42181352-42181851 Glycine max
Glyma.10G188600 0.5kb downstream 0.5kb downstream 19047 true Chr10: 42181852-42200898 Glycine max
Glyma.10G188600 0.5kb downstream 0.5kb downstream 500 false Chr10: 42200399-42200898 Glycine max
Glyma.10G188600 1.0kb upstream 1.0kb upstream 19547 true Chr10: 42180852-42200398 Glycine max
Glyma.10G188600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 42180852-42181851 Glycine max
Glyma.10G188600 1.0kb downstream 1.0kb downstream 19547 true Chr10: 42181852-42201398 Glycine max
Glyma.10G188600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 42200399-42201398 Glycine max
Glyma.10G188600 2.0kb upstream 2.0kb upstream 20547 true Chr10: 42179852-42200398 Glycine max
Glyma.10G188600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 42179852-42181851 Glycine max
Glyma.10G188600 2.0kb downstream 2.0kb downstream 20547 true Chr10: 42181852-42202398 Glycine max
Glyma.10G188600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 42200399-42202398 Glycine max
Glyma.10G188600 5.0kb upstream 5.0kb upstream 23547 true Chr10: 42176852-42200398 Glycine max
Glyma.10G188600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 42176852-42181851 Glycine max
Glyma.10G188600 5.0kb downstream 5.0kb downstream 23547 true Chr10: 42181852-42205398 Glycine max
Glyma.10G188600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 42200399-42205398 Glycine max
Glyma.10G188600 10.0kb upstream 10.0kb upstream 28547 true Chr10: 42171852-42200398 Glycine max
Glyma.10G188600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 42171852-42181851 Glycine max
Glyma.10G188600 10.0kb downstream 10.0kb downstream 28547 true Chr10: 42181852-42210398 Glycine max
Glyma.10G188600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 42200399-42210398 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312741 5265 Fabidae View MSA
124063906 5270 Rosid View MSA
123740151 5271 Pentapetalae View MSA
122794933 5272 Eudicot View MSA
122043519 5273 Angiosperm View MSA
121350769 5274 Embryophyte View MSA
123425613 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.36487 0.0 29.0762    
cufflinks 6.07929 0.0 21.0165    
cufflinks 11.0972 0.0 39.5465   High
cufflinks 6.32633 0.0 21.9937    
cufflinks 5.64501 0.0 19.6785    
cufflinks 6.18493 0.0 21.4778    
cufflinks 12.9355 0.0 46.7867   High
cufflinks 5.73405 0.0 20.1737    
cufflinks 6.51491 0.0 22.4489    
cufflinks 0.875       Low
cufflinks 2.159       High
cufflinks 1.518        
cufflinks 0.908       Low
cufflinks 0.841       Low
cufflinks 2.178       High
cufflinks 1.298        
cufflinks 0.845       Low
cufflinks 1.289        
cufflinks 1.179        
cufflinks 1.583        
cufflinks 1.901       High
cufflinks 1.441        
cufflinks 1.033        
cufflinks 1.933       High
cufflinks 1.424        
cufflinks 1.457        

0 Strain