Gene : Glyma.10G189200 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31280:SF1 - F19P19.6 PROTEIN Genomic Order:  1892
Name:  ? Glyma.10G189200 Secondary Identifier:  ? PAC:30475219
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G189200 0.5kb upstream 0.5kb upstream 5175 true Chr10: 42232061-42237235 Glycine max
Glyma.10G189200 0.5kb upstream 0.5kb upstream 500 false Chr10: 42236736-42237235 Glycine max
Glyma.10G189200 0.5kb downstream 0.5kb downstream 5175 true Chr10: 42231561-42236735 Glycine max
Glyma.10G189200 0.5kb downstream 0.5kb downstream 500 false Chr10: 42231561-42232060 Glycine max
Glyma.10G189200 1.0kb upstream 1.0kb upstream 5675 true Chr10: 42232061-42237735 Glycine max
Glyma.10G189200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 42236736-42237735 Glycine max
Glyma.10G189200 1.0kb downstream 1.0kb downstream 5675 true Chr10: 42231061-42236735 Glycine max
Glyma.10G189200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 42231061-42232060 Glycine max
Glyma.10G189200 2.0kb upstream 2.0kb upstream 6675 true Chr10: 42232061-42238735 Glycine max
Glyma.10G189200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 42236736-42238735 Glycine max
Glyma.10G189200 2.0kb downstream 2.0kb downstream 6675 true Chr10: 42230061-42236735 Glycine max
Glyma.10G189200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 42230061-42232060 Glycine max
Glyma.10G189200 5.0kb upstream 5.0kb upstream 9675 true Chr10: 42232061-42241735 Glycine max
Glyma.10G189200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 42236736-42241735 Glycine max
Glyma.10G189200 5.0kb downstream 5.0kb downstream 9675 true Chr10: 42227061-42236735 Glycine max
Glyma.10G189200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 42227061-42232060 Glycine max
Glyma.10G189200 10.0kb upstream 10.0kb upstream 14675 true Chr10: 42232061-42246735 Glycine max
Glyma.10G189200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 42236736-42246735 Glycine max
Glyma.10G189200 10.0kb downstream 10.0kb downstream 14675 true Chr10: 42222061-42236735 Glycine max
Glyma.10G189200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 42222061-42232060 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306146 5265 Fabidae View MSA
124064567 5270 Rosid View MSA
123739737 5271 Pentapetalae View MSA
122788845 5272 Eudicot View MSA
122044246 5273 Angiosperm View MSA
121310260 5274 Embryophyte View MSA
123347799 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.245156 0.0 0.901147    
cufflinks 0.402124 0.0 1.43395    
cufflinks 2.97969 0.0 8.34968   High
cufflinks 0.174665 0.0 0.65317 Low  
cufflinks 0.38957 0.0 1.3902    
cufflinks 0.081405 0.0 0.314948 Low  
cufflinks 3.1626 0.0 8.80648   High
cufflinks 0.174332 0.0 0.651626 Low  
cufflinks 0.0533036 0.0 0.209655 Low Low
cufflinks 0.343        
cufflinks 0.145        
cufflinks 0.882       High
cufflinks 0.196        
cufflinks 0.248        
cufflinks 0.024     Low Low
cufflinks 0.161        
cufflinks 0.904       High
cufflinks 1.139       High
cufflinks 0.318        
cufflinks 0.069     Low Low
cufflinks 0.137        
cufflinks 0.145        
cufflinks 0.071     Low  
cufflinks 0.08        
cufflinks 0.117        
cufflinks 0.26        

0 Strain