Gene : Glyma.10G189300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR13301//PTHR13301:SF41 - X-BOX TRANSCRIPTION FACTOR-RELATED Genomic Order:  1893
Name:  ? Glyma.10G189300 Secondary Identifier:  ? PAC:30474087
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1001 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G189300 0.5kb upstream 0.5kb upstream 4143 true Chr10: 42237098-42241240 Glycine max
Glyma.10G189300 0.5kb upstream 0.5kb upstream 500 false Chr10: 42237098-42237597 Glycine max
Glyma.10G189300 0.5kb downstream 0.5kb downstream 4143 true Chr10: 42237598-42241740 Glycine max
Glyma.10G189300 0.5kb downstream 0.5kb downstream 500 false Chr10: 42241241-42241740 Glycine max
Glyma.10G189300 1.0kb upstream 1.0kb upstream 4643 true Chr10: 42236598-42241240 Glycine max
Glyma.10G189300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 42236598-42237597 Glycine max
Glyma.10G189300 1.0kb downstream 1.0kb downstream 4643 true Chr10: 42237598-42242240 Glycine max
Glyma.10G189300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 42241241-42242240 Glycine max
Glyma.10G189300 2.0kb upstream 2.0kb upstream 5643 true Chr10: 42235598-42241240 Glycine max
Glyma.10G189300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 42235598-42237597 Glycine max
Glyma.10G189300 2.0kb downstream 2.0kb downstream 5643 true Chr10: 42237598-42243240 Glycine max
Glyma.10G189300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 42241241-42243240 Glycine max
Glyma.10G189300 5.0kb upstream 5.0kb upstream 8643 true Chr10: 42232598-42241240 Glycine max
Glyma.10G189300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 42232598-42237597 Glycine max
Glyma.10G189300 5.0kb downstream 5.0kb downstream 8643 true Chr10: 42237598-42246240 Glycine max
Glyma.10G189300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 42241241-42246240 Glycine max
Glyma.10G189300 10.0kb upstream 10.0kb upstream 13643 true Chr10: 42227598-42241240 Glycine max
Glyma.10G189300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 42227598-42237597 Glycine max
Glyma.10G189300 10.0kb downstream 10.0kb downstream 13643 true Chr10: 42237598-42251240 Glycine max
Glyma.10G189300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 42241241-42251240 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309823 5265 Fabidae View MSA
124070260 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.3172 0.0 92.8909 High High
cufflinks 12.9922 0.0 34.6631    
cufflinks 21.3948 0.0 57.8746 High  
cufflinks 9.20951 0.0 24.7354    
cufflinks 3.1576 0.0 9.37144   Low
cufflinks 4.57442 0.0 12.9311   Low
cufflinks 17.5128 0.0 46.8725    
cufflinks 11.0975 0.0 29.6519    
cufflinks 5.20425 0.0 14.5183    
cufflinks 8.288     High  
cufflinks 4.557        
cufflinks 14.068     High High
cufflinks 1.468       Low
cufflinks 0.656       Low
cufflinks 0.87       Low
cufflinks 8.435     High  
cufflinks 2.047        
cufflinks 5.683        
cufflinks 8.715     High  
cufflinks 14.876     High High
cufflinks 3.49        
cufflinks 11.316     High  
cufflinks 6.332        
cufflinks 7.512     High  
cufflinks 13.463     High High
cufflinks 1.815        

0 Strain