Gene : Glyma.10G192000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11064:SF27 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED Genomic Order:  1920
Name:  ? Glyma.10G192000 Secondary Identifier:  ? PAC:30476933
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G192000 0.5kb upstream 0.5kb upstream 5067 true Chr10: 42450126-42455192 Glycine max
Glyma.10G192000 0.5kb upstream 0.5kb upstream 500 false Chr10: 42450126-42450625 Glycine max
Glyma.10G192000 0.5kb downstream 0.5kb downstream 5067 true Chr10: 42450626-42455692 Glycine max
Glyma.10G192000 0.5kb downstream 0.5kb downstream 500 false Chr10: 42455193-42455692 Glycine max
Glyma.10G192000 1.0kb upstream 1.0kb upstream 5567 true Chr10: 42449626-42455192 Glycine max
Glyma.10G192000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 42449626-42450625 Glycine max
Glyma.10G192000 1.0kb downstream 1.0kb downstream 5567 true Chr10: 42450626-42456192 Glycine max
Glyma.10G192000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 42455193-42456192 Glycine max
Glyma.10G192000 2.0kb upstream 2.0kb upstream 6567 true Chr10: 42448626-42455192 Glycine max
Glyma.10G192000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 42448626-42450625 Glycine max
Glyma.10G192000 2.0kb downstream 2.0kb downstream 6567 true Chr10: 42450626-42457192 Glycine max
Glyma.10G192000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 42455193-42457192 Glycine max
Glyma.10G192000 5.0kb upstream 5.0kb upstream 9567 true Chr10: 42445626-42455192 Glycine max
Glyma.10G192000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 42445626-42450625 Glycine max
Glyma.10G192000 5.0kb downstream 5.0kb downstream 9567 true Chr10: 42450626-42460192 Glycine max
Glyma.10G192000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 42455193-42460192 Glycine max
Glyma.10G192000 10.0kb upstream 10.0kb upstream 14567 true Chr10: 42440626-42455192 Glycine max
Glyma.10G192000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 42440626-42450625 Glycine max
Glyma.10G192000 10.0kb downstream 10.0kb downstream 14567 true Chr10: 42450626-42465192 Glycine max
Glyma.10G192000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 42455193-42465192 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307934 5265 Fabidae View MSA
124066236 5270 Rosid View MSA
123751737 5271 Pentapetalae View MSA
122797656 5272 Eudicot View MSA
122048596 5273 Angiosperm View MSA
123429094 5275 Viridiplantae View MSA
121350139 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.1132 0.0 42.7929   Low
cufflinks 12.7566 0.0 56.3307    
cufflinks 11.3151 0.0 52.7053    
cufflinks 15.8881 0.0 65.1135   High
cufflinks 12.7278 0.0 56.9993    
cufflinks 12.4377 0.0 50.0966    
cufflinks 16.2653 0.0 62.009   High
cufflinks 14.7016 0.0 69.0614    
cufflinks 9.69435 0.0 41.2832   Low
cufflinks 0.759        
cufflinks 0.601        
cufflinks 0.574        
cufflinks 0.557        
cufflinks 0.739        
cufflinks 0.81       High
cufflinks 0.591        
cufflinks 0.383       Low
cufflinks 0.851       High
cufflinks 0.682        
cufflinks 0.598        
cufflinks 0.546        
cufflinks 0.548        
cufflinks 0.795       High
cufflinks 0.649        
cufflinks 0.615        
cufflinks 0.333       Low

0 Strain