Gene : Glyma.10G178300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31371:SF4 - SIMILARITY TO UNKNOWN PROTEIN Genomic Order:  1783
Name:  ? Glyma.10G178300 Secondary Identifier:  ? PAC:30475377
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G178300 0.5kb upstream 0.5kb upstream 2999 true Chr10: 41157826-41160824 Glycine max
Glyma.10G178300 0.5kb upstream 0.5kb upstream 500 false Chr10: 41157826-41158325 Glycine max
Glyma.10G178300 0.5kb downstream 0.5kb downstream 2999 true Chr10: 41158326-41161324 Glycine max
Glyma.10G178300 0.5kb downstream 0.5kb downstream 500 false Chr10: 41160825-41161324 Glycine max
Glyma.10G178300 1.0kb upstream 1.0kb upstream 3499 true Chr10: 41157326-41160824 Glycine max
Glyma.10G178300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 41157326-41158325 Glycine max
Glyma.10G178300 1.0kb downstream 1.0kb downstream 3499 true Chr10: 41158326-41161824 Glycine max
Glyma.10G178300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 41160825-41161824 Glycine max
Glyma.10G178300 2.0kb upstream 2.0kb upstream 4499 true Chr10: 41156326-41160824 Glycine max
Glyma.10G178300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 41156326-41158325 Glycine max
Glyma.10G178300 2.0kb downstream 2.0kb downstream 4499 true Chr10: 41158326-41162824 Glycine max
Glyma.10G178300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 41160825-41162824 Glycine max
Glyma.10G178300 5.0kb upstream 5.0kb upstream 7499 true Chr10: 41153326-41160824 Glycine max
Glyma.10G178300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 41153326-41158325 Glycine max
Glyma.10G178300 5.0kb downstream 5.0kb downstream 7499 true Chr10: 41158326-41165824 Glycine max
Glyma.10G178300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 41160825-41165824 Glycine max
Glyma.10G178300 10.0kb upstream 10.0kb upstream 12499 true Chr10: 41148326-41160824 Glycine max
Glyma.10G178300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 41148326-41158325 Glycine max
Glyma.10G178300 10.0kb downstream 10.0kb downstream 12499 true Chr10: 41158326-41170824 Glycine max
Glyma.10G178300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 41160825-41170824 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302430 5265 Fabidae View MSA
124067622 5270 Rosid View MSA
123740922 5271 Pentapetalae View MSA
122785631 5272 Eudicot View MSA
122049619 5273 Angiosperm View MSA
121344351 5274 Embryophyte View MSA
123380027 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.41855 0.0 4.65475    
cufflinks 0.784162 0.0 2.74892    
cufflinks 0.319438 0.0 1.18767   Low
cufflinks 0.289857 0.0 1.0811   Low
cufflinks 2.78205 0.0 8.26969   High
cufflinks 2.4954 0.0 7.54335    
cufflinks 0.496113 0.0 1.79538    
cufflinks 2.98686 0.0 8.81784   High
cufflinks 1.99369 0.0 6.22475    
cufflinks 0.969        
cufflinks 0.304       Low
cufflinks 0.626        
cufflinks 2.379       High
cufflinks 2.085       High
cufflinks 0.666        
cufflinks 1.182        
cufflinks 1.126        
cufflinks 0.398       Low
cufflinks 1.048        
cufflinks 0.748        
cufflinks 0.477        
cufflinks 1.226        
cufflinks 1.135        
cufflinks 0.46       Low
cufflinks 0.903        
cufflinks 0.469        

0 Strain