Gene : Glyma.10G178500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11711:SF31 - ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 5 Genomic Order:  1785
Name:  ? Glyma.10G178500 Secondary Identifier:  ? PAC:30476310
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G178500 0.5kb upstream 0.5kb upstream 3376 true Chr10: 41177563-41180938 Glycine max
Glyma.10G178500 0.5kb upstream 0.5kb upstream 500 false Chr10: 41177563-41178062 Glycine max
Glyma.10G178500 0.5kb downstream 0.5kb downstream 3376 true Chr10: 41178063-41181438 Glycine max
Glyma.10G178500 0.5kb downstream 0.5kb downstream 500 false Chr10: 41180939-41181438 Glycine max
Glyma.10G178500 1.0kb upstream 1.0kb upstream 3876 true Chr10: 41177063-41180938 Glycine max
Glyma.10G178500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 41177063-41178062 Glycine max
Glyma.10G178500 1.0kb downstream 1.0kb downstream 3876 true Chr10: 41178063-41181938 Glycine max
Glyma.10G178500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 41180939-41181938 Glycine max
Glyma.10G178500 2.0kb upstream 2.0kb upstream 4876 true Chr10: 41176063-41180938 Glycine max
Glyma.10G178500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 41176063-41178062 Glycine max
Glyma.10G178500 2.0kb downstream 2.0kb downstream 4876 true Chr10: 41178063-41182938 Glycine max
Glyma.10G178500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 41180939-41182938 Glycine max
Glyma.10G178500 5.0kb upstream 5.0kb upstream 7876 true Chr10: 41173063-41180938 Glycine max
Glyma.10G178500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 41173063-41178062 Glycine max
Glyma.10G178500 5.0kb downstream 5.0kb downstream 7876 true Chr10: 41178063-41185938 Glycine max
Glyma.10G178500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 41180939-41185938 Glycine max
Glyma.10G178500 10.0kb upstream 10.0kb upstream 12876 true Chr10: 41168063-41180938 Glycine max
Glyma.10G178500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 41168063-41178062 Glycine max
Glyma.10G178500 10.0kb downstream 10.0kb downstream 12876 true Chr10: 41178063-41190938 Glycine max
Glyma.10G178500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 41180939-41190938 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304968 5265 Fabidae View MSA
124068641 5270 Rosid View MSA
123737509 5271 Pentapetalae View MSA
122788196 5272 Eudicot View MSA
122049759 5273 Angiosperm View MSA
123429166 5275 Viridiplantae View MSA
121351098 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.4571 0.0 34.4559    
cufflinks 8.25002 0.0 28.5899   Low
cufflinks 19.7225 0.0 67.7427    
cufflinks 12.1086 0.0 44.5873    
cufflinks 17.8886 0.0 62.2556    
cufflinks 55.1708 0.0 194.739 High High
cufflinks 10.4612 0.0 34.3715    
cufflinks 15.7201 0.0 55.5557    
cufflinks 18.369 0.0 63.7093    
cufflinks 4.443        
cufflinks 8.588     High High
cufflinks 4.229        
cufflinks 5.26        
cufflinks 6.199        
cufflinks 3.523        
cufflinks 1.923       Low
cufflinks 6.599     High  
cufflinks 3.476        
cufflinks 1.622       Low
cufflinks 1.658       Low
cufflinks 6.055     High  
cufflinks 1.969       Low
cufflinks 2.178        
cufflinks 10.145     High High
cufflinks 1.815       Low
cufflinks 6.757     High  

0 Strain