Gene : Glyma.10G180100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31734:SF30 - AUXIN-RESPONSIVE PROTEIN IAA14-RELATED Genomic Order:  1801
Name:  ? Glyma.10G180100 Secondary Identifier:  ? PAC:30478298
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G180100 0.5kb upstream 0.5kb upstream 3382 true Chr10: 41371065-41374446 Glycine max
Glyma.10G180100 0.5kb upstream 0.5kb upstream 500 false Chr10: 41371065-41371564 Glycine max
Glyma.10G180100 0.5kb downstream 0.5kb downstream 3382 true Chr10: 41371565-41374946 Glycine max
Glyma.10G180100 0.5kb downstream 0.5kb downstream 500 false Chr10: 41374447-41374946 Glycine max
Glyma.10G180100 1.0kb upstream 1.0kb upstream 3882 true Chr10: 41370565-41374446 Glycine max
Glyma.10G180100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 41370565-41371564 Glycine max
Glyma.10G180100 1.0kb downstream 1.0kb downstream 3882 true Chr10: 41371565-41375446 Glycine max
Glyma.10G180100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 41374447-41375446 Glycine max
Glyma.10G180100 2.0kb upstream 2.0kb upstream 4882 true Chr10: 41369565-41374446 Glycine max
Glyma.10G180100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 41369565-41371564 Glycine max
Glyma.10G180100 2.0kb downstream 2.0kb downstream 4882 true Chr10: 41371565-41376446 Glycine max
Glyma.10G180100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 41374447-41376446 Glycine max
Glyma.10G180100 5.0kb upstream 5.0kb upstream 7882 true Chr10: 41366565-41374446 Glycine max
Glyma.10G180100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 41366565-41371564 Glycine max
Glyma.10G180100 5.0kb downstream 5.0kb downstream 7882 true Chr10: 41371565-41379446 Glycine max
Glyma.10G180100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 41374447-41379446 Glycine max
Glyma.10G180100 10.0kb upstream 10.0kb upstream 12882 true Chr10: 41361565-41374446 Glycine max
Glyma.10G180100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 41361565-41371564 Glycine max
Glyma.10G180100 10.0kb downstream 10.0kb downstream 12882 true Chr10: 41371565-41384446 Glycine max
Glyma.10G180100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 41374447-41384446 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305422 5265 Fabidae View MSA
124071523 5270 Rosid View MSA
123744630 5271 Pentapetalae View MSA
122796049 5272 Eudicot View MSA
122042007 5273 Angiosperm View MSA
121309912 5274 Embryophyte View MSA
123347544 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 49.786 0.0 137.362 High  
cufflinks 4.62675 0.0 13.9555   Low
cufflinks 99.9287 0.0 302.51 High  
cufflinks 15.6399 0.0 41.984    
cufflinks 185.855 0.0 630.482 High High
cufflinks 192.386 0.0 658.913 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 37.2955 0.0 100.94 High  
cufflinks 73.1567 0.0 210.781 High  
cufflinks 57.299     High  
cufflinks 19.055     High  
cufflinks 37.029     High  
cufflinks 166.358     High High
cufflinks 142.555     High High
cufflinks 0.641       Low
cufflinks 53.005     High  
cufflinks 13.502     High  
cufflinks 6.995        
cufflinks 2.26       Low
cufflinks 56.204     High  
cufflinks 26.253     High  
cufflinks 47.022     High  
cufflinks 24.831     High  
cufflinks 14.924     High  
cufflinks 61.598     High  
cufflinks 28.419     High  

0 Strain