Gene : Glyma.10G182900 G. max Wm82.a2.v1
Defline:  (1 of 23) PF04755 - PAP_fibrillin (PAP_fibrillin) Genomic Order:  1829
Name:  ? Glyma.10G182900 Secondary Identifier:  ? PAC:30476013
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G182900 0.5kb upstream 0.5kb upstream 2264 true Chr10: 41602272-41604535 Glycine max
Glyma.10G182900 0.5kb upstream 0.5kb upstream 500 false Chr10: 41604036-41604535 Glycine max
Glyma.10G182900 0.5kb downstream 0.5kb downstream 2264 true Chr10: 41601772-41604035 Glycine max
Glyma.10G182900 0.5kb downstream 0.5kb downstream 500 false Chr10: 41601772-41602271 Glycine max
Glyma.10G182900 1.0kb upstream 1.0kb upstream 2764 true Chr10: 41602272-41605035 Glycine max
Glyma.10G182900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 41604036-41605035 Glycine max
Glyma.10G182900 1.0kb downstream 1.0kb downstream 2764 true Chr10: 41601272-41604035 Glycine max
Glyma.10G182900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 41601272-41602271 Glycine max
Glyma.10G182900 2.0kb upstream 2.0kb upstream 3764 true Chr10: 41602272-41606035 Glycine max
Glyma.10G182900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 41604036-41606035 Glycine max
Glyma.10G182900 2.0kb downstream 2.0kb downstream 3764 true Chr10: 41600272-41604035 Glycine max
Glyma.10G182900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 41600272-41602271 Glycine max
Glyma.10G182900 5.0kb upstream 5.0kb upstream 6764 true Chr10: 41602272-41609035 Glycine max
Glyma.10G182900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 41604036-41609035 Glycine max
Glyma.10G182900 5.0kb downstream 5.0kb downstream 6764 true Chr10: 41597272-41604035 Glycine max
Glyma.10G182900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 41597272-41602271 Glycine max
Glyma.10G182900 10.0kb upstream 10.0kb upstream 11764 true Chr10: 41602272-41614035 Glycine max
Glyma.10G182900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 41604036-41614035 Glycine max
Glyma.10G182900 10.0kb downstream 10.0kb downstream 11764 true Chr10: 41592272-41604035 Glycine max
Glyma.10G182900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 41592272-41602271 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301966 5265 Fabidae View MSA
124068895 5270 Rosid View MSA
123753457 5271 Pentapetalae View MSA
122789473 5272 Eudicot View MSA
122042297 5273 Angiosperm View MSA
121345801 5274 Embryophyte View MSA
123427802 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.355997 0.0 1.39907    
cufflinks 0.887321 0.0 3.35421    
cufflinks 0.156337 0.0 0.633784 Low Low
cufflinks 1.75407 0.0 6.40905   High
cufflinks 0.207217 0.0 0.829892 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.279061 0.0 1.10609    
cufflinks 0.169443 0.0 0.683544 Low  
cufflinks 0.520462 0.0 2.01312    
cufflinks 0.16        
cufflinks 11.668     High High
cufflinks 0.424        
cufflinks 0.252        
cufflinks 0.514        
cufflinks 16.547     High High
cufflinks 0.186        
cufflinks 0.946        
cufflinks 0.846        
cufflinks 1.005        
cufflinks 0.148        
cufflinks 19.852     High High
cufflinks 0.151        
cufflinks 0.099     Low Low
cufflinks 9.038     High High
cufflinks 0.172        
cufflinks 7.927     High High

0 Strain