Gene : Glyma.10G172400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24006:SF526 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 10-RELATED Genomic Order:  1724
Name:  ? Glyma.10G172400 Secondary Identifier:  ? PAC:30477618
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G172400 0.5kb upstream 0.5kb upstream 11672 true Chr10: 40592783-40604454 Glycine max
Glyma.10G172400 0.5kb upstream 0.5kb upstream 500 false Chr10: 40603955-40604454 Glycine max
Glyma.10G172400 0.5kb downstream 0.5kb downstream 11672 true Chr10: 40592283-40603954 Glycine max
Glyma.10G172400 0.5kb downstream 0.5kb downstream 500 false Chr10: 40592283-40592782 Glycine max
Glyma.10G172400 1.0kb upstream 1.0kb upstream 12172 true Chr10: 40592783-40604954 Glycine max
Glyma.10G172400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 40603955-40604954 Glycine max
Glyma.10G172400 1.0kb downstream 1.0kb downstream 12172 true Chr10: 40591783-40603954 Glycine max
Glyma.10G172400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40591783-40592782 Glycine max
Glyma.10G172400 2.0kb upstream 2.0kb upstream 13172 true Chr10: 40592783-40605954 Glycine max
Glyma.10G172400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 40603955-40605954 Glycine max
Glyma.10G172400 2.0kb downstream 2.0kb downstream 13172 true Chr10: 40590783-40603954 Glycine max
Glyma.10G172400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 40590783-40592782 Glycine max
Glyma.10G172400 5.0kb upstream 5.0kb upstream 16172 true Chr10: 40592783-40608954 Glycine max
Glyma.10G172400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 40603955-40608954 Glycine max
Glyma.10G172400 5.0kb downstream 5.0kb downstream 16172 true Chr10: 40587783-40603954 Glycine max
Glyma.10G172400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 40587783-40592782 Glycine max
Glyma.10G172400 10.0kb upstream 10.0kb upstream 21172 true Chr10: 40592783-40613954 Glycine max
Glyma.10G172400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 40603955-40613954 Glycine max
Glyma.10G172400 10.0kb downstream 10.0kb downstream 21172 true Chr10: 40582783-40603954 Glycine max
Glyma.10G172400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 40582783-40592782 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303511 5265 Fabidae View MSA
124063277 5270 Rosid View MSA
123740103 5271 Pentapetalae View MSA
122793775 5272 Eudicot View MSA
122043130 5273 Angiosperm View MSA
121310077 5274 Embryophyte View MSA
123426305 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.48176 0.0 19.9967    
cufflinks 6.15697 0.0 16.5438    
cufflinks 7.10968 0.0 19.0033    
cufflinks 7.10537 0.0 19.0047    
cufflinks 7.408 0.0 19.8079    
cufflinks 6.3034 0.0 16.9204    
cufflinks 7.03243 0.0 18.8287    
cufflinks 5.50725 0.0 14.866   Low
cufflinks 7.62779 0.0 20.3782   High
cufflinks 2.468        
cufflinks 1.625       Low
cufflinks 3.134        
cufflinks 3.49       High
cufflinks 4.296       High
cufflinks 1.772       Low
cufflinks 2.461        
cufflinks 2.556        
cufflinks 3.479       High
cufflinks 3.409       High
cufflinks 2.436        
cufflinks 2.151        
cufflinks 2.689        
cufflinks 2.919        
cufflinks 2.332        
cufflinks 2.156        
cufflinks 2.214        

0 Strain