Gene : Glyma.10G172500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14571:SF9 - PHD FINGER PROTEIN 13 Genomic Order:  1725
Name:  ? Glyma.10G172500 Secondary Identifier:  ? PAC:30474423
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G172500 0.5kb upstream 0.5kb upstream 10070 true Chr10: 40613946-40624015 Glycine max
Glyma.10G172500 0.5kb upstream 0.5kb upstream 500 false Chr10: 40613946-40614445 Glycine max
Glyma.10G172500 0.5kb downstream 0.5kb downstream 10070 true Chr10: 40614446-40624515 Glycine max
Glyma.10G172500 0.5kb downstream 0.5kb downstream 500 false Chr10: 40624016-40624515 Glycine max
Glyma.10G172500 1.0kb upstream 1.0kb upstream 10570 true Chr10: 40613446-40624015 Glycine max
Glyma.10G172500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 40613446-40614445 Glycine max
Glyma.10G172500 1.0kb downstream 1.0kb downstream 10570 true Chr10: 40614446-40625015 Glycine max
Glyma.10G172500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40624016-40625015 Glycine max
Glyma.10G172500 2.0kb upstream 2.0kb upstream 11570 true Chr10: 40612446-40624015 Glycine max
Glyma.10G172500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 40612446-40614445 Glycine max
Glyma.10G172500 2.0kb downstream 2.0kb downstream 11570 true Chr10: 40614446-40626015 Glycine max
Glyma.10G172500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 40624016-40626015 Glycine max
Glyma.10G172500 5.0kb upstream 5.0kb upstream 14570 true Chr10: 40609446-40624015 Glycine max
Glyma.10G172500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 40609446-40614445 Glycine max
Glyma.10G172500 5.0kb downstream 5.0kb downstream 14570 true Chr10: 40614446-40629015 Glycine max
Glyma.10G172500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 40624016-40629015 Glycine max
Glyma.10G172500 10.0kb upstream 10.0kb upstream 19570 true Chr10: 40604446-40624015 Glycine max
Glyma.10G172500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 40604446-40614445 Glycine max
Glyma.10G172500 10.0kb downstream 10.0kb downstream 19570 true Chr10: 40614446-40634015 Glycine max
Glyma.10G172500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 40624016-40634015 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302365 5265 Fabidae View MSA
124061869 5270 Rosid View MSA
123737201 5271 Pentapetalae View MSA
122791412 5272 Eudicot View MSA
122046243 5273 Angiosperm View MSA
121350322 5274 Embryophyte View MSA
123426833 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.19639 0.0 17.8874    
cufflinks 5.38418 0.0 16.1227    
cufflinks 5.19425 0.0 15.6015    
cufflinks 5.39348 0.0 18.5788    
cufflinks 3.38221 0.0 12.3016   Low
cufflinks 3.53314 0.0 12.5817   Low
cufflinks 6.27715 0.0 21.4124   High
cufflinks 3.87481 0.0 11.8958    
cufflinks 4.27461 0.0 13.0305    
cufflinks 0.99       Low
cufflinks 2.958       High
cufflinks 1.356        
cufflinks 0.768       Low
cufflinks 0.826       Low
cufflinks 2.386        
cufflinks 1.778        
cufflinks 1.332        
cufflinks 1.417        
cufflinks 2.178        
cufflinks 1.742        
cufflinks 3.034       High
cufflinks 1.727        
cufflinks 1.689        
cufflinks 2.505        
cufflinks 1.774        
cufflinks 2.897       High

0 Strain