Gene : Glyma.10G172600 G. max Wm82.a2.v1
Defline:  (1 of 2) 3.7.1.9 - 2-hydroxymuconate-6-semialdehyde hydrolase / 2-hydroxymuconate-semialdehyde hydrolase Genomic Order:  1726
Name:  ? Glyma.10G172600 Secondary Identifier:  ? PAC:30478362
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G172600 0.5kb upstream 0.5kb upstream 5240 true Chr10: 40628401-40633640 Glycine max
Glyma.10G172600 0.5kb upstream 0.5kb upstream 500 false Chr10: 40633141-40633640 Glycine max
Glyma.10G172600 0.5kb downstream 0.5kb downstream 5240 true Chr10: 40627901-40633140 Glycine max
Glyma.10G172600 0.5kb downstream 0.5kb downstream 500 false Chr10: 40627901-40628400 Glycine max
Glyma.10G172600 1.0kb upstream 1.0kb upstream 5740 true Chr10: 40628401-40634140 Glycine max
Glyma.10G172600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 40633141-40634140 Glycine max
Glyma.10G172600 1.0kb downstream 1.0kb downstream 5740 true Chr10: 40627401-40633140 Glycine max
Glyma.10G172600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40627401-40628400 Glycine max
Glyma.10G172600 2.0kb upstream 2.0kb upstream 6740 true Chr10: 40628401-40635140 Glycine max
Glyma.10G172600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 40633141-40635140 Glycine max
Glyma.10G172600 2.0kb downstream 2.0kb downstream 6740 true Chr10: 40626401-40633140 Glycine max
Glyma.10G172600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 40626401-40628400 Glycine max
Glyma.10G172600 5.0kb upstream 5.0kb upstream 9740 true Chr10: 40628401-40638140 Glycine max
Glyma.10G172600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 40633141-40638140 Glycine max
Glyma.10G172600 5.0kb downstream 5.0kb downstream 9740 true Chr10: 40623401-40633140 Glycine max
Glyma.10G172600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 40623401-40628400 Glycine max
Glyma.10G172600 10.0kb upstream 10.0kb upstream 14740 true Chr10: 40628401-40643140 Glycine max
Glyma.10G172600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 40633141-40643140 Glycine max
Glyma.10G172600 10.0kb downstream 10.0kb downstream 14740 true Chr10: 40618401-40633140 Glycine max
Glyma.10G172600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 40618401-40628400 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041325 5273 Angiosperm View MSA
122304001 5265 Fabidae View MSA
124067777 5270 Rosid View MSA
123748154 5271 Pentapetalae View MSA
122796674 5272 Eudicot View MSA
121349939 5274 Embryophyte View MSA
123428460 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.584657 0.0 2.62174   Low
cufflinks 8.86626 0.0 33.547   High
cufflinks 2.02283 0.0 6.7585    
cufflinks 1.84704 0.0 6.4152    
cufflinks 1.27735 0.0 4.82834    
cufflinks 2.51408 0.0 7.8008    
cufflinks 1.79253 0.0 6.27356    
cufflinks 2.57481 0.0 7.90833    
cufflinks 0.780189 0.0 3.37764   Low
cufflinks 1.959       High
cufflinks 0.044     Low Low
cufflinks 0.921        
cufflinks 0.012     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.054       Low
cufflinks 0.634        
cufflinks 0.769        
cufflinks 1.486        
cufflinks 4.803       High
cufflinks 0.241        
cufflinks 0.164        
cufflinks 0.446        
cufflinks 1.094        
cufflinks 0.117        
cufflinks 0.45        
cufflinks 0.275        

0 Strain