Gene : Glyma.10G173200 G. max Wm82.a2.v1
Defline:  (1 of 18) KOG3399 - Predicted Yippee-type zinc-binding protein Genomic Order:  1732
Name:  ? Glyma.10G173200 Secondary Identifier:  ? PAC:30475786
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G173200 0.5kb upstream 0.5kb upstream 2389 true Chr10: 40700739-40703127 Glycine max
Glyma.10G173200 0.5kb upstream 0.5kb upstream 500 false Chr10: 40700739-40701238 Glycine max
Glyma.10G173200 0.5kb downstream 0.5kb downstream 2389 true Chr10: 40701239-40703627 Glycine max
Glyma.10G173200 0.5kb downstream 0.5kb downstream 500 false Chr10: 40703128-40703627 Glycine max
Glyma.10G173200 1.0kb upstream 1.0kb upstream 2889 true Chr10: 40700239-40703127 Glycine max
Glyma.10G173200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 40700239-40701238 Glycine max
Glyma.10G173200 1.0kb downstream 1.0kb downstream 2889 true Chr10: 40701239-40704127 Glycine max
Glyma.10G173200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40703128-40704127 Glycine max
Glyma.10G173200 2.0kb upstream 2.0kb upstream 3889 true Chr10: 40699239-40703127 Glycine max
Glyma.10G173200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 40699239-40701238 Glycine max
Glyma.10G173200 2.0kb downstream 2.0kb downstream 3889 true Chr10: 40701239-40705127 Glycine max
Glyma.10G173200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 40703128-40705127 Glycine max
Glyma.10G173200 5.0kb upstream 5.0kb upstream 6889 true Chr10: 40696239-40703127 Glycine max
Glyma.10G173200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 40696239-40701238 Glycine max
Glyma.10G173200 5.0kb downstream 5.0kb downstream 6889 true Chr10: 40701239-40708127 Glycine max
Glyma.10G173200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 40703128-40708127 Glycine max
Glyma.10G173200 10.0kb upstream 10.0kb upstream 11889 true Chr10: 40691239-40703127 Glycine max
Glyma.10G173200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 40691239-40701238 Glycine max
Glyma.10G173200 10.0kb downstream 10.0kb downstream 11889 true Chr10: 40701239-40713127 Glycine max
Glyma.10G173200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 40703128-40713127 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041337 5273 Angiosperm View MSA
122254387 5265 Fabidae View MSA
124072414 5270 Rosid View MSA
123752615 5271 Pentapetalae View MSA
122791285 5272 Eudicot View MSA
123428914 5275 Viridiplantae View MSA
121343957 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.900768 0.0 3.76803    
cufflinks 2.86871 0.0 11.5924    
cufflinks 2.13205 0.0 8.43544    
cufflinks 2.67596 0.0 10.7949    
cufflinks 2.23295 0.0 13.6557    
cufflinks 1.07655 0.0 7.98278    
cufflinks 0.221388 0.0 2.21599   Low
cufflinks 14.7345 0.0 50.999   High
cufflinks 2.20769 0.0 12.9499    
cufflinks 2.049       High
cufflinks 0.772        
cufflinks 0.877        
cufflinks 0.702        
cufflinks 0.767        
cufflinks 0.663        
cufflinks 0.48        
cufflinks 1.266        
cufflinks 1.952       High
cufflinks 0.394        
cufflinks 0.426        
cufflinks 0.656        
cufflinks 0.671        
cufflinks 0.125       Low
cufflinks 1.358        
cufflinks 0.745        
cufflinks 0.653        

0 Strain