Gene : Glyma.10G173300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23322:SF1 - FAS-ASSOCIATED FACTOR 2 Genomic Order:  1733
Name:  ? Glyma.10G173300 Secondary Identifier:  ? PAC:30475069
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G173300 0.5kb upstream 0.5kb upstream 7554 true Chr10: 40706365-40713918 Glycine max
Glyma.10G173300 0.5kb upstream 0.5kb upstream 500 false Chr10: 40713419-40713918 Glycine max
Glyma.10G173300 0.5kb downstream 0.5kb downstream 7554 true Chr10: 40705865-40713418 Glycine max
Glyma.10G173300 0.5kb downstream 0.5kb downstream 500 false Chr10: 40705865-40706364 Glycine max
Glyma.10G173300 1.0kb upstream 1.0kb upstream 8054 true Chr10: 40706365-40714418 Glycine max
Glyma.10G173300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 40713419-40714418 Glycine max
Glyma.10G173300 1.0kb downstream 1.0kb downstream 8054 true Chr10: 40705365-40713418 Glycine max
Glyma.10G173300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40705365-40706364 Glycine max
Glyma.10G173300 2.0kb upstream 2.0kb upstream 9054 true Chr10: 40706365-40715418 Glycine max
Glyma.10G173300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 40713419-40715418 Glycine max
Glyma.10G173300 2.0kb downstream 2.0kb downstream 9054 true Chr10: 40704365-40713418 Glycine max
Glyma.10G173300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 40704365-40706364 Glycine max
Glyma.10G173300 5.0kb upstream 5.0kb upstream 12054 true Chr10: 40706365-40718418 Glycine max
Glyma.10G173300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 40713419-40718418 Glycine max
Glyma.10G173300 5.0kb downstream 5.0kb downstream 12054 true Chr10: 40701365-40713418 Glycine max
Glyma.10G173300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 40701365-40706364 Glycine max
Glyma.10G173300 10.0kb upstream 10.0kb upstream 17054 true Chr10: 40706365-40723418 Glycine max
Glyma.10G173300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 40713419-40723418 Glycine max
Glyma.10G173300 10.0kb downstream 10.0kb downstream 17054 true Chr10: 40696365-40713418 Glycine max
Glyma.10G173300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 40696365-40706364 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299435 5265 Fabidae View MSA
124063311 5270 Rosid View MSA
123749858 5271 Pentapetalae View MSA
122791969 5272 Eudicot View MSA
122043233 5273 Angiosperm View MSA
121344275 5274 Embryophyte View MSA
123424827 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.0609 0.0 48.2352    
cufflinks 12.9594 0.0 34.6506   Low
cufflinks 17.1505 0.0 45.7635    
cufflinks 19.2053 0.0 51.3465   High
cufflinks 16.8202 0.0 44.9022    
cufflinks 14.9221 0.0 39.8142    
cufflinks 14.8842 0.0 39.7112    
cufflinks 17.0438 0.0 45.4904    
cufflinks 17.0043 0.0 45.3838    
cufflinks 3.873        
cufflinks 4.186        
cufflinks 3.689        
cufflinks 3.685        
cufflinks 3.832        
cufflinks 3.172       Low
cufflinks 4.084        
cufflinks 3.045       Low
cufflinks 3.604        
cufflinks 4.188        
cufflinks 4.223        
cufflinks 3.502        
cufflinks 4.159        
cufflinks 4.056        
cufflinks 4.487       High
cufflinks 3.952        
cufflinks 3.645        

0 Strain