Gene : Glyma.10G177400 G. max Wm82.a2.v1
Defline:  (1 of 14) PF07279 - Protein of unknown function (DUF1442) (DUF1442) Genomic Order:  1774
Name:  ? Glyma.10G177400 Secondary Identifier:  ? PAC:30475075
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G177400 0.5kb upstream 0.5kb upstream 1654 true Chr10: 41078452-41080105 Glycine max
Glyma.10G177400 0.5kb upstream 0.5kb upstream 500 false Chr10: 41079606-41080105 Glycine max
Glyma.10G177400 0.5kb downstream 0.5kb downstream 1654 true Chr10: 41077952-41079605 Glycine max
Glyma.10G177400 0.5kb downstream 0.5kb downstream 500 false Chr10: 41077952-41078451 Glycine max
Glyma.10G177400 1.0kb upstream 1.0kb upstream 2154 true Chr10: 41078452-41080605 Glycine max
Glyma.10G177400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 41079606-41080605 Glycine max
Glyma.10G177400 1.0kb downstream 1.0kb downstream 2154 true Chr10: 41077452-41079605 Glycine max
Glyma.10G177400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 41077452-41078451 Glycine max
Glyma.10G177400 2.0kb upstream 2.0kb upstream 3154 true Chr10: 41078452-41081605 Glycine max
Glyma.10G177400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 41079606-41081605 Glycine max
Glyma.10G177400 2.0kb downstream 2.0kb downstream 3154 true Chr10: 41076452-41079605 Glycine max
Glyma.10G177400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 41076452-41078451 Glycine max
Glyma.10G177400 5.0kb upstream 5.0kb upstream 6154 true Chr10: 41078452-41084605 Glycine max
Glyma.10G177400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 41079606-41084605 Glycine max
Glyma.10G177400 5.0kb downstream 5.0kb downstream 6154 true Chr10: 41073452-41079605 Glycine max
Glyma.10G177400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 41073452-41078451 Glycine max
Glyma.10G177400 10.0kb upstream 10.0kb upstream 11154 true Chr10: 41078452-41089605 Glycine max
Glyma.10G177400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 41079606-41089605 Glycine max
Glyma.10G177400 10.0kb downstream 10.0kb downstream 11154 true Chr10: 41068452-41079605 Glycine max
Glyma.10G177400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 41068452-41078451 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300741 5265 Fabidae View MSA
124072823 5270 Rosid View MSA
123746429 5271 Pentapetalae View MSA
122795029 5272 Eudicot View MSA
122048699 5273 Angiosperm View MSA
121348528 5274 Embryophyte View MSA
123380900 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0439787 0.0 0.18653 Low  
cufflinks 0.0379045 0.0 0.16218 Low  
cufflinks 3.15582E-4 0.0 0.00520891 Low Low
cufflinks 8.98593 0.0 25.8275   High
cufflinks 14.9361 0.0 40.902   High
cufflinks 0.0179911 0.0 0.082403 Low  
cufflinks 0.0293129 0.0 0.12811 Low  
cufflinks 2.88736 0.0 9.67146    
cufflinks 0.671        
cufflinks 0.27        
cufflinks 0.076     Low Low
cufflinks 13.356     High High
cufflinks 16.879     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.562        
cufflinks 0.461        
cufflinks 0.049     Low Low
cufflinks 0.201        
cufflinks 0.784        
cufflinks 0.68        
cufflinks 0.305        
cufflinks 0.279        
cufflinks 0.262        
cufflinks 0.567        
cufflinks 1.991        

0 Strain