Gene : Glyma.10G178000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31500:SF18 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Genomic Order:  1780
Name:  ? Glyma.10G178000 Secondary Identifier:  ? PAC:30475937
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G178000 0.5kb upstream 0.5kb upstream 7818 true Chr10: 41125424-41133241 Glycine max
Glyma.10G178000 0.5kb upstream 0.5kb upstream 500 false Chr10: 41132742-41133241 Glycine max
Glyma.10G178000 0.5kb downstream 0.5kb downstream 7818 true Chr10: 41124924-41132741 Glycine max
Glyma.10G178000 0.5kb downstream 0.5kb downstream 500 false Chr10: 41124924-41125423 Glycine max
Glyma.10G178000 1.0kb upstream 1.0kb upstream 8318 true Chr10: 41125424-41133741 Glycine max
Glyma.10G178000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 41132742-41133741 Glycine max
Glyma.10G178000 1.0kb downstream 1.0kb downstream 8318 true Chr10: 41124424-41132741 Glycine max
Glyma.10G178000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 41124424-41125423 Glycine max
Glyma.10G178000 2.0kb upstream 2.0kb upstream 9318 true Chr10: 41125424-41134741 Glycine max
Glyma.10G178000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 41132742-41134741 Glycine max
Glyma.10G178000 2.0kb downstream 2.0kb downstream 9318 true Chr10: 41123424-41132741 Glycine max
Glyma.10G178000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 41123424-41125423 Glycine max
Glyma.10G178000 5.0kb upstream 5.0kb upstream 12318 true Chr10: 41125424-41137741 Glycine max
Glyma.10G178000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 41132742-41137741 Glycine max
Glyma.10G178000 5.0kb downstream 5.0kb downstream 12318 true Chr10: 41120424-41132741 Glycine max
Glyma.10G178000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 41120424-41125423 Glycine max
Glyma.10G178000 10.0kb upstream 10.0kb upstream 17318 true Chr10: 41125424-41142741 Glycine max
Glyma.10G178000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 41132742-41142741 Glycine max
Glyma.10G178000 10.0kb downstream 10.0kb downstream 17318 true Chr10: 41115424-41132741 Glycine max
Glyma.10G178000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 41115424-41125423 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302074 5265 Fabidae View MSA
124071035 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.57111 0.0 20.961    
cufflinks 3.26154 0.0 10.011   Low
cufflinks 5.66094 0.0 16.105    
cufflinks 3.05165 0.0 9.44385   Low
cufflinks 10.4092 0.0 28.186    
cufflinks 12.9786 0.0 34.7919   High
cufflinks 5.11358 0.0 14.7832    
cufflinks 8.25692 0.0 22.7176    
cufflinks 9.09717 0.0 24.8258    
cufflinks 0.956        
cufflinks 2.057        
cufflinks 1.153        
cufflinks 3.188       High
cufflinks 3.177       High
cufflinks 1.099        
cufflinks 0.551       Low
cufflinks 1.893        
cufflinks 0.556       Low
cufflinks 1.459        
cufflinks 0.422       Low
cufflinks 1.68        
cufflinks 0.58       Low
cufflinks 0.632        
cufflinks 3.022       High
cufflinks 0.52       Low
cufflinks 2.906       High

0 Strain