Gene : Glyma.10G212100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR13377//PTHR13377:SF4 - PLACENTAL PROTEIN 6 Genomic Order:  2121
Name:  ? Glyma.10G212100 Secondary Identifier:  ? PAC:30476460
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G212100 0.5kb upstream 0.5kb upstream 3410 true Chr10: 44472559-44475968 Glycine max
Glyma.10G212100 0.5kb upstream 0.5kb upstream 500 false Chr10: 44472559-44473058 Glycine max
Glyma.10G212100 0.5kb downstream 0.5kb downstream 3410 true Chr10: 44473059-44476468 Glycine max
Glyma.10G212100 0.5kb downstream 0.5kb downstream 500 false Chr10: 44475969-44476468 Glycine max
Glyma.10G212100 1.0kb upstream 1.0kb upstream 3910 true Chr10: 44472059-44475968 Glycine max
Glyma.10G212100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 44472059-44473058 Glycine max
Glyma.10G212100 1.0kb downstream 1.0kb downstream 3910 true Chr10: 44473059-44476968 Glycine max
Glyma.10G212100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 44475969-44476968 Glycine max
Glyma.10G212100 2.0kb upstream 2.0kb upstream 4910 true Chr10: 44471059-44475968 Glycine max
Glyma.10G212100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 44471059-44473058 Glycine max
Glyma.10G212100 2.0kb downstream 2.0kb downstream 4910 true Chr10: 44473059-44477968 Glycine max
Glyma.10G212100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 44475969-44477968 Glycine max
Glyma.10G212100 5.0kb upstream 5.0kb upstream 7910 true Chr10: 44468059-44475968 Glycine max
Glyma.10G212100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 44468059-44473058 Glycine max
Glyma.10G212100 5.0kb downstream 5.0kb downstream 7910 true Chr10: 44473059-44480968 Glycine max
Glyma.10G212100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 44475969-44480968 Glycine max
Glyma.10G212100 10.0kb upstream 10.0kb upstream 12910 true Chr10: 44463059-44475968 Glycine max
Glyma.10G212100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 44463059-44473058 Glycine max
Glyma.10G212100 10.0kb downstream 10.0kb downstream 12910 true Chr10: 44473059-44485968 Glycine max
Glyma.10G212100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 44475969-44485968 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311918 5265 Fabidae View MSA
124061195 5270 Rosid View MSA
123748664 5271 Pentapetalae View MSA
122792028 5272 Eudicot View MSA
122043069 5273 Angiosperm View MSA
121350097 5274 Embryophyte View MSA
123424498 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.52322 0.0 11.229    
cufflinks 5.17157 0.0 15.5931    
cufflinks 1.34038 0.0 4.74126   Low
cufflinks 11.1698 0.0 30.7927   High
cufflinks 6.50643 0.0 19.0377    
cufflinks 3.5245 0.0 11.212    
cufflinks 6.00187 0.0 17.7679    
cufflinks 6.3596 0.0 18.639    
cufflinks 4.26534 0.0 13.2064    
cufflinks 5.252        
cufflinks 0.284       Low
cufflinks 1.024        
cufflinks 5.287        
cufflinks 5.685        
cufflinks 0.099       Low
cufflinks 5.911        
cufflinks 0.67        
cufflinks 3.051        
cufflinks 3.331        
cufflinks 5.263        
cufflinks 0.609        
cufflinks 5.803        
cufflinks 6.702        
cufflinks 0.215       Low
cufflinks 5.311        
cufflinks 0.718        

0 Strain