Gene : Glyma.10G215200 G. max Wm82.a2.v1
Defline:  (1 of 17) PTHR10593//PTHR10593:SF27 - SERINE/THREONINE-PROTEIN KINASE RIO Genomic Order:  2152
Name:  ? Glyma.10G215200 Secondary Identifier:  ? PAC:30477987
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G215200 0.5kb upstream 0.5kb upstream 3344 true Chr10: 44733853-44737196 Glycine max
Glyma.10G215200 0.5kb upstream 0.5kb upstream 500 false Chr10: 44736697-44737196 Glycine max
Glyma.10G215200 0.5kb downstream 0.5kb downstream 3344 true Chr10: 44733353-44736696 Glycine max
Glyma.10G215200 0.5kb downstream 0.5kb downstream 500 false Chr10: 44733353-44733852 Glycine max
Glyma.10G215200 1.0kb upstream 1.0kb upstream 3844 true Chr10: 44733853-44737696 Glycine max
Glyma.10G215200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 44736697-44737696 Glycine max
Glyma.10G215200 1.0kb downstream 1.0kb downstream 3844 true Chr10: 44732853-44736696 Glycine max
Glyma.10G215200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 44732853-44733852 Glycine max
Glyma.10G215200 2.0kb upstream 2.0kb upstream 4844 true Chr10: 44733853-44738696 Glycine max
Glyma.10G215200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 44736697-44738696 Glycine max
Glyma.10G215200 2.0kb downstream 2.0kb downstream 4844 true Chr10: 44731853-44736696 Glycine max
Glyma.10G215200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 44731853-44733852 Glycine max
Glyma.10G215200 5.0kb upstream 5.0kb upstream 7844 true Chr10: 44733853-44741696 Glycine max
Glyma.10G215200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 44736697-44741696 Glycine max
Glyma.10G215200 5.0kb downstream 5.0kb downstream 7844 true Chr10: 44728853-44736696 Glycine max
Glyma.10G215200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 44728853-44733852 Glycine max
Glyma.10G215200 10.0kb upstream 10.0kb upstream 12844 true Chr10: 44733853-44746696 Glycine max
Glyma.10G215200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 44736697-44746696 Glycine max
Glyma.10G215200 10.0kb downstream 10.0kb downstream 12844 true Chr10: 44723853-44736696 Glycine max
Glyma.10G215200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 44723853-44733852 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309425 5265 Fabidae View MSA
124065989 5270 Rosid View MSA
123750703 5271 Pentapetalae View MSA
122786021 5272 Eudicot View MSA
122049146 5273 Angiosperm View MSA
121347779 5274 Embryophyte View MSA
123380625 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.2056 0.0 40.6145    
cufflinks 14.5182 0.0 38.8087    
cufflinks 8.41855 0.0 23.0593   Low
cufflinks 12.0138 0.0 32.2623    
cufflinks 18.7101 0.0 49.9236    
cufflinks 24.677 0.0 66.2345 High High
cufflinks 11.142 0.0 30.0548    
cufflinks 11.4166 0.0 30.7204    
cufflinks 12.6799 0.0 34.015    
cufflinks 14.906     High High
cufflinks 8.216     High  
cufflinks 7.458     High  
cufflinks 13.659     High High
cufflinks 5.806       Low
cufflinks 7.292     High  
cufflinks 8.351     High  
cufflinks 20.113     High High
cufflinks 7.689     High  
cufflinks 9.87     High  
cufflinks 7.994     High  
cufflinks 6.727     High  
cufflinks 9.425     High  
cufflinks 10.246     High  
cufflinks 7.781     High  
cufflinks 7.915     High  
cufflinks 10.875     High  

0 Strain