Gene : Glyma.10G216200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15606:SF3 - GPALPP MOTIFS-CONTAINING PROTEIN 1 Genomic Order:  2162
Name:  ? Glyma.10G216200 Secondary Identifier:  ? PAC:30477851
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G216200 0.5kb upstream 0.5kb upstream 6607 true Chr10: 44785903-44792509 Glycine max
Glyma.10G216200 0.5kb upstream 0.5kb upstream 500 false Chr10: 44785903-44786402 Glycine max
Glyma.10G216200 0.5kb downstream 0.5kb downstream 6607 true Chr10: 44786403-44793009 Glycine max
Glyma.10G216200 0.5kb downstream 0.5kb downstream 500 false Chr10: 44792510-44793009 Glycine max
Glyma.10G216200 1.0kb upstream 1.0kb upstream 7107 true Chr10: 44785403-44792509 Glycine max
Glyma.10G216200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 44785403-44786402 Glycine max
Glyma.10G216200 1.0kb downstream 1.0kb downstream 7107 true Chr10: 44786403-44793509 Glycine max
Glyma.10G216200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 44792510-44793509 Glycine max
Glyma.10G216200 2.0kb upstream 2.0kb upstream 8107 true Chr10: 44784403-44792509 Glycine max
Glyma.10G216200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 44784403-44786402 Glycine max
Glyma.10G216200 2.0kb downstream 2.0kb downstream 8107 true Chr10: 44786403-44794509 Glycine max
Glyma.10G216200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 44792510-44794509 Glycine max
Glyma.10G216200 5.0kb upstream 5.0kb upstream 11107 true Chr10: 44781403-44792509 Glycine max
Glyma.10G216200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 44781403-44786402 Glycine max
Glyma.10G216200 5.0kb downstream 5.0kb downstream 11107 true Chr10: 44786403-44797509 Glycine max
Glyma.10G216200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 44792510-44797509 Glycine max
Glyma.10G216200 10.0kb upstream 10.0kb upstream 16107 true Chr10: 44776403-44792509 Glycine max
Glyma.10G216200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 44776403-44786402 Glycine max
Glyma.10G216200 10.0kb downstream 10.0kb downstream 16107 true Chr10: 44786403-44802509 Glycine max
Glyma.10G216200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 44792510-44802509 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027715 5273 Angiosperm View MSA
122306036 5265 Fabidae View MSA
124066706 5270 Rosid View MSA
123745107 5271 Pentapetalae View MSA
122785830 5272 Eudicot View MSA
121344293 5274 Embryophyte View MSA
123426211 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.9615 0.0 29.2841    
cufflinks 10.8856 0.0 29.0885    
cufflinks 9.01008 0.0 24.1833   Low
cufflinks 10.5087 0.0 28.0825    
cufflinks 9.85775 0.0 26.3882    
cufflinks 10.5776 0.0 28.2785    
cufflinks 14.0525 0.0 37.5029   High
cufflinks 11.7931 0.0 31.4706    
cufflinks 13.195 0.0 35.2033   High
cufflinks 3.285        
cufflinks 3.093       Low
cufflinks 3.715        
cufflinks 3.564        
cufflinks 4.012       High
cufflinks 3.174       Low
cufflinks 3.718        
cufflinks 3.963       High
cufflinks 3.788        
cufflinks 3.654        
cufflinks 3.825        
cufflinks 3.127       Low
cufflinks 4.023       High
cufflinks 4.156       High
cufflinks 3.222       Low
cufflinks 3.524        
cufflinks 3.281        

0 Strain