Gene : Glyma.10G217700 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.7.7.72 - CCA tRNA nucleotidyltransferase / tRNA-nucleotidyltransferase Genomic Order:  2177
Name:  ? Glyma.10G217700 Secondary Identifier:  ? PAC:30475416
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G217700 0.5kb upstream 0.5kb upstream 7646 true Chr10: 44935544-44943189 Glycine max
Glyma.10G217700 0.5kb upstream 0.5kb upstream 500 false Chr10: 44942690-44943189 Glycine max
Glyma.10G217700 0.5kb downstream 0.5kb downstream 7646 true Chr10: 44935044-44942689 Glycine max
Glyma.10G217700 0.5kb downstream 0.5kb downstream 500 false Chr10: 44935044-44935543 Glycine max
Glyma.10G217700 1.0kb upstream 1.0kb upstream 8146 true Chr10: 44935544-44943689 Glycine max
Glyma.10G217700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 44942690-44943689 Glycine max
Glyma.10G217700 1.0kb downstream 1.0kb downstream 8146 true Chr10: 44934544-44942689 Glycine max
Glyma.10G217700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 44934544-44935543 Glycine max
Glyma.10G217700 2.0kb upstream 2.0kb upstream 9146 true Chr10: 44935544-44944689 Glycine max
Glyma.10G217700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 44942690-44944689 Glycine max
Glyma.10G217700 2.0kb downstream 2.0kb downstream 9146 true Chr10: 44933544-44942689 Glycine max
Glyma.10G217700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 44933544-44935543 Glycine max
Glyma.10G217700 5.0kb upstream 5.0kb upstream 12146 true Chr10: 44935544-44947689 Glycine max
Glyma.10G217700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 44942690-44947689 Glycine max
Glyma.10G217700 5.0kb downstream 5.0kb downstream 12146 true Chr10: 44930544-44942689 Glycine max
Glyma.10G217700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 44930544-44935543 Glycine max
Glyma.10G217700 10.0kb upstream 10.0kb upstream 17146 true Chr10: 44935544-44952689 Glycine max
Glyma.10G217700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 44942690-44952689 Glycine max
Glyma.10G217700 10.0kb downstream 10.0kb downstream 17146 true Chr10: 44925544-44942689 Glycine max
Glyma.10G217700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 44925544-44935543 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303528 5265 Fabidae View MSA
124064235 5270 Rosid View MSA
123751527 5271 Pentapetalae View MSA
122793185 5272 Eudicot View MSA
122043482 5273 Angiosperm View MSA
121344625 5274 Embryophyte View MSA
123428724 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.83861 0.0 13.6237    
cufflinks 6.92221 0.0 18.8818    
cufflinks 5.21844 0.0 14.5348    
cufflinks 6.76798 0.0 18.488    
cufflinks 6.37935 0.0 17.5153    
cufflinks 4.1412 0.0 11.847   Low
cufflinks 8.98044 0.0 24.1846   High
cufflinks 5.39583 0.0 15.0033    
cufflinks 7.5396 0.0 20.4513    
cufflinks 1.386        
cufflinks 0.42       Low
cufflinks 2.124       High
cufflinks 2.096       High
cufflinks 2.234       High
cufflinks 1.237        
cufflinks 0.97        
cufflinks 1.238        
cufflinks 2.024       High
cufflinks 2.503       High
cufflinks 0.8        
cufflinks 0.601       Low
cufflinks 0.913        
cufflinks 1.418        
cufflinks 0.661       Low
cufflinks 0.977        
cufflinks 0.894        

0 Strain