Gene : Glyma.10G209400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR20922:SF13 - DNL-TYPE ZINC FINGER PROTEIN Genomic Order:  2094
Name:  ? Glyma.10G209400 Secondary Identifier:  ? PAC:30477893
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G209400 0.5kb upstream 0.5kb upstream 2958 true Chr10: 44143204-44146161 Glycine max
Glyma.10G209400 0.5kb upstream 0.5kb upstream 500 false Chr10: 44145662-44146161 Glycine max
Glyma.10G209400 0.5kb downstream 0.5kb downstream 2958 true Chr10: 44142704-44145661 Glycine max
Glyma.10G209400 0.5kb downstream 0.5kb downstream 500 false Chr10: 44142704-44143203 Glycine max
Glyma.10G209400 1.0kb upstream 1.0kb upstream 3458 true Chr10: 44143204-44146661 Glycine max
Glyma.10G209400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 44145662-44146661 Glycine max
Glyma.10G209400 1.0kb downstream 1.0kb downstream 3458 true Chr10: 44142204-44145661 Glycine max
Glyma.10G209400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 44142204-44143203 Glycine max
Glyma.10G209400 2.0kb upstream 2.0kb upstream 4458 true Chr10: 44143204-44147661 Glycine max
Glyma.10G209400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 44145662-44147661 Glycine max
Glyma.10G209400 2.0kb downstream 2.0kb downstream 4458 true Chr10: 44141204-44145661 Glycine max
Glyma.10G209400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 44141204-44143203 Glycine max
Glyma.10G209400 5.0kb upstream 5.0kb upstream 7458 true Chr10: 44143204-44150661 Glycine max
Glyma.10G209400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 44145662-44150661 Glycine max
Glyma.10G209400 5.0kb downstream 5.0kb downstream 7458 true Chr10: 44138204-44145661 Glycine max
Glyma.10G209400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 44138204-44143203 Glycine max
Glyma.10G209400 10.0kb upstream 10.0kb upstream 12458 true Chr10: 44143204-44155661 Glycine max
Glyma.10G209400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 44145662-44155661 Glycine max
Glyma.10G209400 10.0kb downstream 10.0kb downstream 12458 true Chr10: 44133204-44145661 Glycine max
Glyma.10G209400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 44133204-44143203 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312568 5265 Fabidae View MSA
124064437 5270 Rosid View MSA
123738785 5271 Pentapetalae View MSA
122790651 5272 Eudicot View MSA
122044958 5273 Angiosperm View MSA
121348718 5274 Embryophyte View MSA
123424658 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.25065 0.0 13.4111    
cufflinks 3.09893 0.0 10.2195    
cufflinks 2.84873 0.0 9.43628   Low
cufflinks 3.49567 0.0 11.2954    
cufflinks 2.93469 0.0 9.73454   Low
cufflinks 4.54861 0.0 14.1937   High
cufflinks 5.1155 0.0 15.7105   High
cufflinks 3.59985 0.0 11.6105    
cufflinks 3.38933 0.0 11.0292    
cufflinks 1.109       Low
cufflinks 1.634        
cufflinks 1.696        
cufflinks 1.688        
cufflinks 2.377       High
cufflinks 1.672        
cufflinks 1.242        
cufflinks 0.887       Low
cufflinks 1.62        
cufflinks 1.323        
cufflinks 1.123       Low
cufflinks 1.731        
cufflinks 1.252        
cufflinks 1.368        
cufflinks 1.543        
cufflinks 1.246        
cufflinks 1.58        

0 Strain