Gene : Glyma.10G211400 G. max Wm82.a2.v1
Defline:  (1 of 2) 4.2.3.5 - Chorismate synthase / 5-enolpyruvylshikimate-3-phosphate phospholyase Genomic Order:  2114
Name:  ? Glyma.10G211400 Secondary Identifier:  ? PAC:30475754
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ARO-PWY Glycine max pathologic  
Gmax PWY-6163 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G211400 0.5kb upstream 0.5kb upstream 10865 true Chr10: 44391876-44402740 Glycine max
Glyma.10G211400 0.5kb upstream 0.5kb upstream 500 false Chr10: 44402241-44402740 Glycine max
Glyma.10G211400 0.5kb downstream 0.5kb downstream 10865 true Chr10: 44391376-44402240 Glycine max
Glyma.10G211400 0.5kb downstream 0.5kb downstream 500 false Chr10: 44391376-44391875 Glycine max
Glyma.10G211400 1.0kb upstream 1.0kb upstream 11365 true Chr10: 44391876-44403240 Glycine max
Glyma.10G211400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 44402241-44403240 Glycine max
Glyma.10G211400 1.0kb downstream 1.0kb downstream 11365 true Chr10: 44390876-44402240 Glycine max
Glyma.10G211400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 44390876-44391875 Glycine max
Glyma.10G211400 2.0kb upstream 2.0kb upstream 12365 true Chr10: 44391876-44404240 Glycine max
Glyma.10G211400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 44402241-44404240 Glycine max
Glyma.10G211400 2.0kb downstream 2.0kb downstream 12365 true Chr10: 44389876-44402240 Glycine max
Glyma.10G211400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 44389876-44391875 Glycine max
Glyma.10G211400 5.0kb upstream 5.0kb upstream 15365 true Chr10: 44391876-44407240 Glycine max
Glyma.10G211400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 44402241-44407240 Glycine max
Glyma.10G211400 5.0kb downstream 5.0kb downstream 15365 true Chr10: 44386876-44402240 Glycine max
Glyma.10G211400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 44386876-44391875 Glycine max
Glyma.10G211400 10.0kb upstream 10.0kb upstream 20365 true Chr10: 44391876-44412240 Glycine max
Glyma.10G211400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 44402241-44412240 Glycine max
Glyma.10G211400 10.0kb downstream 10.0kb downstream 20365 true Chr10: 44381876-44402240 Glycine max
Glyma.10G211400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 44381876-44391875 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041230 5273 Angiosperm View MSA
122305453 5265 Fabidae View MSA
124061876 5270 Rosid View MSA
123747909 5271 Pentapetalae View MSA
122787011 5272 Eudicot View MSA
121346403 5274 Embryophyte View MSA
123428194 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.2235 0.0 90.6354 High High
cufflinks 14.8199 0.0 39.6229    
cufflinks 13.1059 0.0 34.9785    
cufflinks 22.8254 0.0 62.2438 High  
cufflinks 15.8077 0.0 42.3455    
cufflinks 21.5847 0.0 58.6525    
cufflinks 8.27805 0.0 22.2508   Low
cufflinks 24.5514 0.0 67.3369 High  
cufflinks 19.3566 0.0 52.2784    
cufflinks 5.318        
cufflinks 1.702       Low
cufflinks 4.115        
cufflinks 5.195        
cufflinks 3.852        
cufflinks 2.993        
cufflinks 4.084        
cufflinks 2.79        
cufflinks 5.514       High
cufflinks 4.947        
cufflinks 5.101        
cufflinks 3.106        
cufflinks 5.528       High
cufflinks 3.88        
cufflinks 3.76        
cufflinks 4.295        
cufflinks 2.406       Low

0 Strain