Gene : Glyma.10G202700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21470//PTHR21470:SF3 - NTKL-BINDING PROTEIN 1 Genomic Order:  2027
Name:  ? Glyma.10G202700 Secondary Identifier:  ? PAC:30476717
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G202700 0.5kb upstream 0.5kb upstream 2558 true Chr10: 43404189-43406746 Glycine max
Glyma.10G202700 0.5kb upstream 0.5kb upstream 500 false Chr10: 43406247-43406746 Glycine max
Glyma.10G202700 0.5kb downstream 0.5kb downstream 2558 true Chr10: 43403689-43406246 Glycine max
Glyma.10G202700 0.5kb downstream 0.5kb downstream 500 false Chr10: 43403689-43404188 Glycine max
Glyma.10G202700 1.0kb upstream 1.0kb upstream 3058 true Chr10: 43404189-43407246 Glycine max
Glyma.10G202700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 43406247-43407246 Glycine max
Glyma.10G202700 1.0kb downstream 1.0kb downstream 3058 true Chr10: 43403189-43406246 Glycine max
Glyma.10G202700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 43403189-43404188 Glycine max
Glyma.10G202700 2.0kb upstream 2.0kb upstream 4058 true Chr10: 43404189-43408246 Glycine max
Glyma.10G202700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 43406247-43408246 Glycine max
Glyma.10G202700 2.0kb downstream 2.0kb downstream 4058 true Chr10: 43402189-43406246 Glycine max
Glyma.10G202700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 43402189-43404188 Glycine max
Glyma.10G202700 5.0kb upstream 5.0kb upstream 7058 true Chr10: 43404189-43411246 Glycine max
Glyma.10G202700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 43406247-43411246 Glycine max
Glyma.10G202700 5.0kb downstream 5.0kb downstream 7058 true Chr10: 43399189-43406246 Glycine max
Glyma.10G202700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 43399189-43404188 Glycine max
Glyma.10G202700 10.0kb upstream 10.0kb upstream 12058 true Chr10: 43404189-43416246 Glycine max
Glyma.10G202700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 43406247-43416246 Glycine max
Glyma.10G202700 10.0kb downstream 10.0kb downstream 12058 true Chr10: 43394189-43406246 Glycine max
Glyma.10G202700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 43394189-43404188 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300513 5265 Fabidae View MSA
124073883 5270 Rosid View MSA
123746647 5271 Pentapetalae View MSA
122796434 5272 Eudicot View MSA
122043123 5273 Angiosperm View MSA
121348137 5274 Embryophyte View MSA
123380740 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.282324 0.0 1.09196   Low
cufflinks 1.7292 0.0 6.05298    
cufflinks 0.38476 0.0 1.46461   Low
cufflinks 1.46832 0.0 5.19387    
cufflinks 1.18805 0.0 4.28049    
cufflinks 0.708653 0.0 2.63072    
cufflinks 0.956075 0.0 3.49402    
cufflinks 2.33359 0.0 7.90821    
cufflinks 4.52238 0.0 14.0761   High
cufflinks 3.964       High
cufflinks 1.725        
cufflinks 1.081        
cufflinks 3.453        
cufflinks 1.499        
cufflinks 0.443       Low
cufflinks 3.159        
cufflinks 0.981       Low
cufflinks 2.768        
cufflinks 0.914       Low
cufflinks 3.241        
cufflinks 1.347        
cufflinks 3.978       High
cufflinks 2.11        
cufflinks 1.895        
cufflinks 3.54       High
cufflinks 1.153        

0 Strain