Gene : Glyma.10G205900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33294:SF5 - AWPM-19-LIKE FAMILY PROTEIN Genomic Order:  2059
Name:  ? Glyma.10G205900 Secondary Identifier:  ? PAC:30476034
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G205900 0.5kb upstream 0.5kb upstream 2022 true Chr10: 43748457-43750478 Glycine max
Glyma.10G205900 0.5kb upstream 0.5kb upstream 500 false Chr10: 43748457-43748956 Glycine max
Glyma.10G205900 0.5kb downstream 0.5kb downstream 2022 true Chr10: 43748957-43750978 Glycine max
Glyma.10G205900 0.5kb downstream 0.5kb downstream 500 false Chr10: 43750479-43750978 Glycine max
Glyma.10G205900 1.0kb upstream 1.0kb upstream 2522 true Chr10: 43747957-43750478 Glycine max
Glyma.10G205900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 43747957-43748956 Glycine max
Glyma.10G205900 1.0kb downstream 1.0kb downstream 2522 true Chr10: 43748957-43751478 Glycine max
Glyma.10G205900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 43750479-43751478 Glycine max
Glyma.10G205900 2.0kb upstream 2.0kb upstream 3522 true Chr10: 43746957-43750478 Glycine max
Glyma.10G205900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 43746957-43748956 Glycine max
Glyma.10G205900 2.0kb downstream 2.0kb downstream 3522 true Chr10: 43748957-43752478 Glycine max
Glyma.10G205900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 43750479-43752478 Glycine max
Glyma.10G205900 5.0kb upstream 5.0kb upstream 6522 true Chr10: 43743957-43750478 Glycine max
Glyma.10G205900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 43743957-43748956 Glycine max
Glyma.10G205900 5.0kb downstream 5.0kb downstream 6522 true Chr10: 43748957-43755478 Glycine max
Glyma.10G205900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 43750479-43755478 Glycine max
Glyma.10G205900 10.0kb upstream 10.0kb upstream 11522 true Chr10: 43738957-43750478 Glycine max
Glyma.10G205900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 43738957-43748956 Glycine max
Glyma.10G205900 10.0kb downstream 10.0kb downstream 11522 true Chr10: 43748957-43760478 Glycine max
Glyma.10G205900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 43750479-43760478 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312985 5265 Fabidae View MSA
124066413 5270 Rosid View MSA
123736675 5271 Pentapetalae View MSA
122790401 5272 Eudicot View MSA
122044376 5273 Angiosperm View MSA
121349282 5274 Embryophyte View MSA
123381254 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0541078 0.0 0.237069 Low Low
cufflinks 6.01852 0.0 19.9342    
cufflinks 7.59859 0.0 28.0563    
cufflinks 0.289697 0.0 1.13559    
cufflinks 3.44629 0.0 16.897    
cufflinks 5.69319 0.0 23.8339    
cufflinks 17.0736 0.0 54.8333   High
cufflinks 0.343952 0.0 1.33956    
cufflinks 1.27785 0.0 5.86729    
cufflinks 0.07     Low  
cufflinks 0.23        
cufflinks 1.508       High
cufflinks 0.055     Low  
cufflinks 0.016     Low Low
cufflinks 0.136        
cufflinks 0.128        
cufflinks 0.012     Low Low
cufflinks 0.911       High
cufflinks 0.189        
cufflinks 0.051     Low  
cufflinks 0.149        
cufflinks 0.058     Low  
cufflinks 0.106        
cufflinks 0.157        
cufflinks 0.393        
cufflinks 0.266        

0 Strain