Gene : Glyma.10G244300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23418:SF4 - 1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4 Genomic Order:  2443
Name:  ? Glyma.10G244300 Secondary Identifier:  ? PAC:30475892
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-4361 Glycine max pathologic  
Gmax PWY-7270 Glycine max pathologic  
Gmax PWY-7528 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G244300 0.5kb upstream 0.5kb upstream 2769 true Chr10: 47252386-47255154 Glycine max
Glyma.10G244300 0.5kb upstream 0.5kb upstream 500 false Chr10: 47254655-47255154 Glycine max
Glyma.10G244300 0.5kb downstream 0.5kb downstream 2769 true Chr10: 47251886-47254654 Glycine max
Glyma.10G244300 0.5kb downstream 0.5kb downstream 500 false Chr10: 47251886-47252385 Glycine max
Glyma.10G244300 1.0kb upstream 1.0kb upstream 3269 true Chr10: 47252386-47255654 Glycine max
Glyma.10G244300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 47254655-47255654 Glycine max
Glyma.10G244300 1.0kb downstream 1.0kb downstream 3269 true Chr10: 47251386-47254654 Glycine max
Glyma.10G244300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 47251386-47252385 Glycine max
Glyma.10G244300 2.0kb upstream 2.0kb upstream 4269 true Chr10: 47252386-47256654 Glycine max
Glyma.10G244300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 47254655-47256654 Glycine max
Glyma.10G244300 2.0kb downstream 2.0kb downstream 4269 true Chr10: 47250386-47254654 Glycine max
Glyma.10G244300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 47250386-47252385 Glycine max
Glyma.10G244300 5.0kb upstream 5.0kb upstream 7269 true Chr10: 47252386-47259654 Glycine max
Glyma.10G244300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 47254655-47259654 Glycine max
Glyma.10G244300 5.0kb downstream 5.0kb downstream 7269 true Chr10: 47247386-47254654 Glycine max
Glyma.10G244300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 47247386-47252385 Glycine max
Glyma.10G244300 10.0kb upstream 10.0kb upstream 12269 true Chr10: 47252386-47264654 Glycine max
Glyma.10G244300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 47254655-47264654 Glycine max
Glyma.10G244300 10.0kb downstream 10.0kb downstream 12269 true Chr10: 47242386-47254654 Glycine max
Glyma.10G244300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 47242386-47252385 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308555 5265 Fabidae View MSA
124070684 5270 Rosid View MSA
123741202 5271 Pentapetalae View MSA
122793339 5272 Eudicot View MSA
122046510 5273 Angiosperm View MSA
121343851 5274 Embryophyte View MSA
123424670 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 72.0729 0.0 280.038 High High
cufflinks 8.50605 0.0 30.956    
cufflinks 5.93865 0.0 22.6259    
cufflinks 16.9641 0.0 62.7735    
cufflinks 8.06026 0.0 35.3501    
cufflinks 19.8305 0.0 68.5241    
cufflinks 2.93072 0.0 14.2475   Low
cufflinks 15.327 0.0 57.9211    
cufflinks 9.62954 0.0 32.428    
cufflinks 1.079        
cufflinks 0.512       Low
cufflinks 1.876        
cufflinks 1.225        
cufflinks 0.596       Low
cufflinks 0.336       Low
cufflinks 2.036        
cufflinks 1.382        
cufflinks 2.667       High
cufflinks 1.118        
cufflinks 2.623       High
cufflinks 0.645       Low
cufflinks 2.569       High
cufflinks 2.007        
cufflinks 0.946        
cufflinks 2.405       High
cufflinks 1.504        

0 Strain