Gene : Glyma.10G245200 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11830 - 40S RIBOSOMAL PROTEIN S3A Genomic Order:  2452
Name:  ? Glyma.10G245200 Secondary Identifier:  ? PAC:30473964
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G245200 0.5kb upstream 0.5kb upstream 3043 true Chr10: 47372982-47376024 Glycine max
Glyma.10G245200 0.5kb upstream 0.5kb upstream 500 false Chr10: 47372982-47373481 Glycine max
Glyma.10G245200 0.5kb downstream 0.5kb downstream 3043 true Chr10: 47373482-47376524 Glycine max
Glyma.10G245200 0.5kb downstream 0.5kb downstream 500 false Chr10: 47376025-47376524 Glycine max
Glyma.10G245200 1.0kb upstream 1.0kb upstream 3543 true Chr10: 47372482-47376024 Glycine max
Glyma.10G245200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 47372482-47373481 Glycine max
Glyma.10G245200 1.0kb downstream 1.0kb downstream 3543 true Chr10: 47373482-47377024 Glycine max
Glyma.10G245200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 47376025-47377024 Glycine max
Glyma.10G245200 2.0kb upstream 2.0kb upstream 4543 true Chr10: 47371482-47376024 Glycine max
Glyma.10G245200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 47371482-47373481 Glycine max
Glyma.10G245200 2.0kb downstream 2.0kb downstream 4543 true Chr10: 47373482-47378024 Glycine max
Glyma.10G245200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 47376025-47378024 Glycine max
Glyma.10G245200 5.0kb upstream 5.0kb upstream 7543 true Chr10: 47368482-47376024 Glycine max
Glyma.10G245200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 47368482-47373481 Glycine max
Glyma.10G245200 5.0kb downstream 5.0kb downstream 7543 true Chr10: 47373482-47381024 Glycine max
Glyma.10G245200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 47376025-47381024 Glycine max
Glyma.10G245200 10.0kb upstream 10.0kb upstream 12543 true Chr10: 47363482-47376024 Glycine max
Glyma.10G245200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 47363482-47373481 Glycine max
Glyma.10G245200 10.0kb downstream 10.0kb downstream 12543 true Chr10: 47373482-47386024 Glycine max
Glyma.10G245200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 47376025-47386024 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307732 5265 Fabidae View MSA
124066895 5270 Rosid View MSA
123743383 5271 Pentapetalae View MSA
122787922 5272 Eudicot View MSA
122049456 5273 Angiosperm View MSA
121347467 5274 Embryophyte View MSA
123424177 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 144.377 0.0 600.014 High  
cufflinks 147.832 0.0 624.13 High  
cufflinks 65.6546 0.0 251.22 High Low
cufflinks 116.197 0.0 452.697 High  
cufflinks 259.146 0.0 1424.24 High High
cufflinks 187.633 0.0 870.965 High  
cufflinks 178.563 0.0 626.457 High  
cufflinks 141.729 0.0 616.481 High  
cufflinks 176.364 0.0 805.349 High  
cufflinks 41.963     High  
cufflinks 9.746     High Low
cufflinks 32.522     High  
cufflinks 106.576     High High
cufflinks 164.817     High High
cufflinks 10.125     High Low
cufflinks 42.503     High  
cufflinks 21.088     High  
cufflinks 35.067     High  
cufflinks 44.086     High  
cufflinks 32.575     High  
cufflinks 21.006     High  
cufflinks 34.023     High  
cufflinks 46.687     High  
cufflinks 13.327     High Low
cufflinks 43.625     High  
cufflinks 27.56     High  

0 Strain