Gene : Glyma.10G245800 G. max Wm82.a2.v1
Defline:  (1 of 35) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Genomic Order:  2458
Name:  ? Glyma.10G245800 Secondary Identifier:  ? PAC:30476162
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G245800 0.5kb upstream 0.5kb upstream 1876 true Chr10: 47420269-47422144 Glycine max
Glyma.10G245800 0.5kb upstream 0.5kb upstream 500 false Chr10: 47420269-47420768 Glycine max
Glyma.10G245800 0.5kb downstream 0.5kb downstream 1876 true Chr10: 47420769-47422644 Glycine max
Glyma.10G245800 0.5kb downstream 0.5kb downstream 500 false Chr10: 47422145-47422644 Glycine max
Glyma.10G245800 1.0kb upstream 1.0kb upstream 2376 true Chr10: 47419769-47422144 Glycine max
Glyma.10G245800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 47419769-47420768 Glycine max
Glyma.10G245800 1.0kb downstream 1.0kb downstream 2376 true Chr10: 47420769-47423144 Glycine max
Glyma.10G245800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 47422145-47423144 Glycine max
Glyma.10G245800 2.0kb upstream 2.0kb upstream 3376 true Chr10: 47418769-47422144 Glycine max
Glyma.10G245800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 47418769-47420768 Glycine max
Glyma.10G245800 2.0kb downstream 2.0kb downstream 3376 true Chr10: 47420769-47424144 Glycine max
Glyma.10G245800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 47422145-47424144 Glycine max
Glyma.10G245800 5.0kb upstream 5.0kb upstream 6376 true Chr10: 47415769-47422144 Glycine max
Glyma.10G245800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 47415769-47420768 Glycine max
Glyma.10G245800 5.0kb downstream 5.0kb downstream 6376 true Chr10: 47420769-47427144 Glycine max
Glyma.10G245800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 47422145-47427144 Glycine max
Glyma.10G245800 10.0kb upstream 10.0kb upstream 11376 true Chr10: 47410769-47422144 Glycine max
Glyma.10G245800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 47410769-47420768 Glycine max
Glyma.10G245800 10.0kb downstream 10.0kb downstream 11376 true Chr10: 47420769-47432144 Glycine max
Glyma.10G245800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 47422145-47432144 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031651 5273 Angiosperm View MSA
122297659 5265 Fabidae View MSA
124075064 5270 Rosid View MSA
123628735 5271 Pentapetalae View MSA
122662989 5272 Eudicot View MSA
121300660 5274 Embryophyte View MSA
123338397 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0776568 0.0 0.316359 Low  
cufflinks 1.44421 0.0 5.14008   High
cufflinks 0.0122376 0.0 0.057899 Low Low
cufflinks 0.0622533 0.0 0.256372 Low  
cufflinks 0.409862 0.0 1.5607    
cufflinks 0.107414 0.0 0.43121 Low  
cufflinks 0.0168699 0.0 0.0772675 Low Low
cufflinks 2.80468 0.0 9.31809   High
cufflinks 0.324883 0.0 1.24886    
cufflinks 0.134        
cufflinks 0.085        
cufflinks 0.047     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.602       High
cufflinks 1.455       High
cufflinks 0.163        
cufflinks 0.47        
cufflinks 0.21        
cufflinks 0.267        
cufflinks 0.474        
cufflinks 0.065     Low Low
cufflinks 0.068       Low
cufflinks 0.767       High
cufflinks 0.152        

0 Strain