Gene : Glyma.10G248000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31791:SF2 - FRIGIDA-LIKE PROTEIN 4A-RELATED Genomic Order:  2480
Name:  ? Glyma.10G248000 Secondary Identifier:  ? PAC:30476150
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G248000 0.5kb upstream 0.5kb upstream 3479 true Chr10: 47635284-47638762 Glycine max
Glyma.10G248000 0.5kb upstream 0.5kb upstream 500 false Chr10: 47638263-47638762 Glycine max
Glyma.10G248000 0.5kb downstream 0.5kb downstream 3479 true Chr10: 47634784-47638262 Glycine max
Glyma.10G248000 0.5kb downstream 0.5kb downstream 500 false Chr10: 47634784-47635283 Glycine max
Glyma.10G248000 1.0kb upstream 1.0kb upstream 3979 true Chr10: 47635284-47639262 Glycine max
Glyma.10G248000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 47638263-47639262 Glycine max
Glyma.10G248000 1.0kb downstream 1.0kb downstream 3979 true Chr10: 47634284-47638262 Glycine max
Glyma.10G248000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 47634284-47635283 Glycine max
Glyma.10G248000 2.0kb upstream 2.0kb upstream 4979 true Chr10: 47635284-47640262 Glycine max
Glyma.10G248000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 47638263-47640262 Glycine max
Glyma.10G248000 2.0kb downstream 2.0kb downstream 4979 true Chr10: 47633284-47638262 Glycine max
Glyma.10G248000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 47633284-47635283 Glycine max
Glyma.10G248000 5.0kb upstream 5.0kb upstream 7979 true Chr10: 47635284-47643262 Glycine max
Glyma.10G248000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 47638263-47643262 Glycine max
Glyma.10G248000 5.0kb downstream 5.0kb downstream 7979 true Chr10: 47630284-47638262 Glycine max
Glyma.10G248000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 47630284-47635283 Glycine max
Glyma.10G248000 10.0kb upstream 10.0kb upstream 12979 true Chr10: 47635284-47648262 Glycine max
Glyma.10G248000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 47638263-47648262 Glycine max
Glyma.10G248000 10.0kb downstream 10.0kb downstream 12979 true Chr10: 47625284-47638262 Glycine max
Glyma.10G248000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 47625284-47635283 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302614 5265 Fabidae View MSA
124064726 5270 Rosid View MSA
123738104 5271 Pentapetalae View MSA
122790313 5272 Eudicot View MSA
122044909 5273 Angiosperm View MSA
121351127 5274 Embryophyte View MSA
123382017 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 90.8932 0.0 294.426 High  
cufflinks 136.47 0.0 480.696 High High
cufflinks 70.9441 0.0 216.557 High  
cufflinks 71.1494 0.0 219.185 High  
cufflinks 63.0651 0.0 192.846 High  
cufflinks 26.2255 0.0 71.6452 High Low
cufflinks 138.596 0.0 494.678 High High
cufflinks 46.3623 0.0 134.233 High  
cufflinks 44.263 0.0 127.593 High  
cufflinks 36.451     High  
cufflinks 38.176     High  
cufflinks 30.722     High  
cufflinks 21.069     High Low
cufflinks 24.759     High  
cufflinks 23.284     High Low
cufflinks 59.807     High High
cufflinks 18.873     High Low
cufflinks 31.684     High  
cufflinks 84.018     High High
cufflinks 60.578     High High
cufflinks 32.058     High  
cufflinks 55.091     High  
cufflinks 50.636     High  
cufflinks 44.922     High  
cufflinks 52.356     High  
cufflinks 20.724     High Low

0 Strain