Gene : Glyma.10G248100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21596//PTHR21596:SF11 - RIBONUCLEASE P SUBUNIT P38 Genomic Order:  2481
Name:  ? Glyma.10G248100 Secondary Identifier:  ? PAC:30475289
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G248100 0.5kb upstream 0.5kb upstream 10049 true Chr10: 47642922-47652970 Glycine max
Glyma.10G248100 0.5kb upstream 0.5kb upstream 500 false Chr10: 47652471-47652970 Glycine max
Glyma.10G248100 0.5kb downstream 0.5kb downstream 10049 true Chr10: 47642422-47652470 Glycine max
Glyma.10G248100 0.5kb downstream 0.5kb downstream 500 false Chr10: 47642422-47642921 Glycine max
Glyma.10G248100 1.0kb upstream 1.0kb upstream 10549 true Chr10: 47642922-47653470 Glycine max
Glyma.10G248100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 47652471-47653470 Glycine max
Glyma.10G248100 1.0kb downstream 1.0kb downstream 10549 true Chr10: 47641922-47652470 Glycine max
Glyma.10G248100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 47641922-47642921 Glycine max
Glyma.10G248100 2.0kb upstream 2.0kb upstream 11549 true Chr10: 47642922-47654470 Glycine max
Glyma.10G248100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 47652471-47654470 Glycine max
Glyma.10G248100 2.0kb downstream 2.0kb downstream 11549 true Chr10: 47640922-47652470 Glycine max
Glyma.10G248100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 47640922-47642921 Glycine max
Glyma.10G248100 5.0kb upstream 5.0kb upstream 14549 true Chr10: 47642922-47657470 Glycine max
Glyma.10G248100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 47652471-47657470 Glycine max
Glyma.10G248100 5.0kb downstream 5.0kb downstream 14549 true Chr10: 47637922-47652470 Glycine max
Glyma.10G248100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 47637922-47642921 Glycine max
Glyma.10G248100 10.0kb upstream 10.0kb upstream 19549 true Chr10: 47642922-47662470 Glycine max
Glyma.10G248100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 47652471-47662470 Glycine max
Glyma.10G248100 10.0kb downstream 10.0kb downstream 19549 true Chr10: 47632922-47652470 Glycine max
Glyma.10G248100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 47632922-47642921 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303515 5265 Fabidae View MSA
124063905 5270 Rosid View MSA
123737259 5271 Pentapetalae View MSA
122789928 5272 Eudicot View MSA
122042202 5273 Angiosperm View MSA
121309933 5274 Embryophyte View MSA
123347562 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.61505 0.0 34.3871   High
cufflinks 6.17979 0.0 26.5967    
cufflinks 7.1913 0.0 30.3936    
cufflinks 6.13561 0.0 25.8689    
cufflinks 7.97946 0.0 32.003    
cufflinks 5.19812 0.0 22.6915   Low
cufflinks 7.67557 0.0 31.1558    
cufflinks 5.63408 0.0 24.4114   Low
cufflinks 7.50452 0.0 30.4896    
cufflinks 0.297       Low
cufflinks 0.614        
cufflinks 0.48        
cufflinks 0.396        
cufflinks 0.546        
cufflinks 0.518        
cufflinks 0.602        
cufflinks 0.264       Low
cufflinks 0.421        
cufflinks 0.608        
cufflinks 0.689       High
cufflinks 0.457        
cufflinks 0.635        
cufflinks 0.503        
cufflinks 0.593        
cufflinks 0.612        
cufflinks 0.407        

0 Strain