Gene : Glyma.10G236800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11361:SF34 - DNA MISMATCH REPAIR PROTEIN MSH3 Genomic Order:  2368
Name:  ? Glyma.10G236800 Secondary Identifier:  ? PAC:30475565
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G236800 0.5kb upstream 0.5kb upstream 4229 true Chr10: 46559259-46563487 Glycine max
Glyma.10G236800 0.5kb upstream 0.5kb upstream 500 false Chr10: 46559259-46559758 Glycine max
Glyma.10G236800 0.5kb downstream 0.5kb downstream 4229 true Chr10: 46559759-46563987 Glycine max
Glyma.10G236800 0.5kb downstream 0.5kb downstream 500 false Chr10: 46563488-46563987 Glycine max
Glyma.10G236800 1.0kb upstream 1.0kb upstream 4729 true Chr10: 46558759-46563487 Glycine max
Glyma.10G236800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 46558759-46559758 Glycine max
Glyma.10G236800 1.0kb downstream 1.0kb downstream 4729 true Chr10: 46559759-46564487 Glycine max
Glyma.10G236800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 46563488-46564487 Glycine max
Glyma.10G236800 2.0kb upstream 2.0kb upstream 5729 true Chr10: 46557759-46563487 Glycine max
Glyma.10G236800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 46557759-46559758 Glycine max
Glyma.10G236800 2.0kb downstream 2.0kb downstream 5729 true Chr10: 46559759-46565487 Glycine max
Glyma.10G236800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 46563488-46565487 Glycine max
Glyma.10G236800 5.0kb upstream 5.0kb upstream 8729 true Chr10: 46554759-46563487 Glycine max
Glyma.10G236800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 46554759-46559758 Glycine max
Glyma.10G236800 5.0kb downstream 5.0kb downstream 8729 true Chr10: 46559759-46568487 Glycine max
Glyma.10G236800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 46563488-46568487 Glycine max
Glyma.10G236800 10.0kb upstream 10.0kb upstream 13729 true Chr10: 46549759-46563487 Glycine max
Glyma.10G236800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 46549759-46559758 Glycine max
Glyma.10G236800 10.0kb downstream 10.0kb downstream 13729 true Chr10: 46559759-46573487 Glycine max
Glyma.10G236800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 46563488-46573487 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122239542 5265 Fabidae Singleton cluster - no MSA
124038796 5270 Rosid View MSA
123749181 5271 Pentapetalae View MSA
122792549 5272 Eudicot View MSA
122042085 5273 Angiosperm View MSA
121347991 5274 Embryophyte View MSA
123423769 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0774709 0.0 0.316064 Low  
cufflinks 0.0245354 0.0 0.108601 Low  
cufflinks 0.161747 0.0 0.640295 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0195904 0.0 0.0886654 Low Low
cufflinks 0.07931 0.0 0.323111 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.013     Low  
cufflinks 0.004     Low Low
cufflinks 0.003     Low Low
cufflinks 0.011     Low  
cufflinks 0.112       High
cufflinks 0.005     Low Low
cufflinks 0.037     Low  
cufflinks 0.035     Low  
cufflinks 0.029     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.037     Low  
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.037     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain