Gene : Glyma.10G238800 G. max Wm82.a2.v1
Defline:  (1 of 5) 1.17.1.8 - 4-hydroxy-tetrahydrodipicolinate reductase / Dihydrodipicolinate reductase Genomic Order:  2388
Name:  ? Glyma.10G238800 Secondary Identifier:  ? PAC:30473999
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5097 Glycine max pathologic  
Gmax PWY-724 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G238800 0.5kb upstream 0.5kb upstream 3493 true Chr10: 46725288-46728780 Glycine max
Glyma.10G238800 0.5kb upstream 0.5kb upstream 500 false Chr10: 46728281-46728780 Glycine max
Glyma.10G238800 0.5kb downstream 0.5kb downstream 3493 true Chr10: 46724788-46728280 Glycine max
Glyma.10G238800 0.5kb downstream 0.5kb downstream 500 false Chr10: 46724788-46725287 Glycine max
Glyma.10G238800 1.0kb upstream 1.0kb upstream 3993 true Chr10: 46725288-46729280 Glycine max
Glyma.10G238800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 46728281-46729280 Glycine max
Glyma.10G238800 1.0kb downstream 1.0kb downstream 3993 true Chr10: 46724288-46728280 Glycine max
Glyma.10G238800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 46724288-46725287 Glycine max
Glyma.10G238800 2.0kb upstream 2.0kb upstream 4993 true Chr10: 46725288-46730280 Glycine max
Glyma.10G238800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 46728281-46730280 Glycine max
Glyma.10G238800 2.0kb downstream 2.0kb downstream 4993 true Chr10: 46723288-46728280 Glycine max
Glyma.10G238800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 46723288-46725287 Glycine max
Glyma.10G238800 5.0kb upstream 5.0kb upstream 7993 true Chr10: 46725288-46733280 Glycine max
Glyma.10G238800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 46728281-46733280 Glycine max
Glyma.10G238800 5.0kb downstream 5.0kb downstream 7993 true Chr10: 46720288-46728280 Glycine max
Glyma.10G238800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 46720288-46725287 Glycine max
Glyma.10G238800 10.0kb upstream 10.0kb upstream 12993 true Chr10: 46725288-46738280 Glycine max
Glyma.10G238800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 46728281-46738280 Glycine max
Glyma.10G238800 10.0kb downstream 10.0kb downstream 12993 true Chr10: 46715288-46728280 Glycine max
Glyma.10G238800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 46715288-46725287 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302709 5265 Fabidae View MSA
124065069 5270 Rosid View MSA
123739710 5271 Pentapetalae View MSA
122786759 5272 Eudicot View MSA
122042958 5273 Angiosperm View MSA
121344567 5274 Embryophyte View MSA
123380066 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.58438 0.0 31.39   High
cufflinks 1.77765 0.0 9.40764   High
cufflinks 0.486906 0.0 5.15777    
cufflinks 0.351119 0.0 2.93737    
cufflinks 0.20021 0.0 0.782493 Low  
cufflinks 0.248148 0.0 0.961237 Low  
cufflinks 0.04382 0.0 0.187284 Low Low
cufflinks 0.22714 0.0 1.62257 Low  
cufflinks 0.0496404 0.0 0.213994 Low Low
cufflinks 0.074     Low  
cufflinks 0.04     Low  
cufflinks 0.067     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.008     Low Low
cufflinks 2.466       High
cufflinks 0.018     Low  
cufflinks 0.057     Low  
cufflinks 0.152        
cufflinks 3.69       High
cufflinks 0.018     Low  
cufflinks 2.812       High
cufflinks 1.94       High
cufflinks 0.01     Low  
cufflinks 3.032       High
cufflinks 0.005     Low Low

0 Strain