Gene : Glyma.10G239300 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  2393
Name:  ? Glyma.10G239300 Secondary Identifier:  ? PAC:30477361
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G239300 0.5kb upstream 0.5kb upstream 1964 true Chr10: 46791792-46793755 Glycine max
Glyma.10G239300 0.5kb upstream 0.5kb upstream 500 false Chr10: 46791792-46792291 Glycine max
Glyma.10G239300 0.5kb downstream 0.5kb downstream 1964 true Chr10: 46792292-46794255 Glycine max
Glyma.10G239300 0.5kb downstream 0.5kb downstream 500 false Chr10: 46793756-46794255 Glycine max
Glyma.10G239300 1.0kb upstream 1.0kb upstream 2464 true Chr10: 46791292-46793755 Glycine max
Glyma.10G239300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 46791292-46792291 Glycine max
Glyma.10G239300 1.0kb downstream 1.0kb downstream 2464 true Chr10: 46792292-46794755 Glycine max
Glyma.10G239300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 46793756-46794755 Glycine max
Glyma.10G239300 2.0kb upstream 2.0kb upstream 3464 true Chr10: 46790292-46793755 Glycine max
Glyma.10G239300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 46790292-46792291 Glycine max
Glyma.10G239300 2.0kb downstream 2.0kb downstream 3464 true Chr10: 46792292-46795755 Glycine max
Glyma.10G239300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 46793756-46795755 Glycine max
Glyma.10G239300 5.0kb upstream 5.0kb upstream 6464 true Chr10: 46787292-46793755 Glycine max
Glyma.10G239300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 46787292-46792291 Glycine max
Glyma.10G239300 5.0kb downstream 5.0kb downstream 6464 true Chr10: 46792292-46798755 Glycine max
Glyma.10G239300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 46793756-46798755 Glycine max
Glyma.10G239300 10.0kb upstream 10.0kb upstream 11464 true Chr10: 46782292-46793755 Glycine max
Glyma.10G239300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 46782292-46792291 Glycine max
Glyma.10G239300 10.0kb downstream 10.0kb downstream 11464 true Chr10: 46792292-46803755 Glycine max
Glyma.10G239300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 46793756-46803755 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303157 5265 Fabidae View MSA
124070637 5270 Rosid View MSA
123747343 5271 Pentapetalae View MSA
122787056 5272 Eudicot View MSA
122049572 5273 Angiosperm View MSA
121351578 5274 Embryophyte View MSA
123382234 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.392082 0.0 1.48822    
cufflinks 1.42073 0.0 5.01853   High
cufflinks 0.322013 0.0 1.2343    
cufflinks 0.0845321 0.0 0.341192 Low Low
cufflinks 0.324613 0.0 1.241    
cufflinks 0.313757 0.0 1.20193    
cufflinks 0.0440467 0.0 0.183921 Low Low
cufflinks 0.429083 0.0 1.62329    
cufflinks 0.16793 0.0 0.659991 Low  
cufflinks 3.613        
cufflinks 12.117     High  
cufflinks 0.733        
cufflinks 0.153       Low
cufflinks 0.228       Low
cufflinks 1.404        
cufflinks 2.724        
cufflinks 131.554     High High
cufflinks 0.637        
cufflinks 0.363        
cufflinks 1.065        
cufflinks 25.151     High High
cufflinks 1.695        
cufflinks 0.633        
cufflinks 6.404     High  
cufflinks 1.427        
cufflinks 11.828     High  

0 Strain