Gene : Glyma.10G239900 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR14237:SF28 - CATALYTIC/ PYRIDOXAL PHOSPHATE BINDING PROTEIN Genomic Order:  2399
Name:  ? Glyma.10G239900 Secondary Identifier:  ? PAC:30478122
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5963 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G239900 0.5kb upstream 0.5kb upstream 3066 true Chr10: 46854195-46857260 Glycine max
Glyma.10G239900 0.5kb upstream 0.5kb upstream 500 false Chr10: 46854195-46854694 Glycine max
Glyma.10G239900 0.5kb downstream 0.5kb downstream 3066 true Chr10: 46854695-46857760 Glycine max
Glyma.10G239900 0.5kb downstream 0.5kb downstream 500 false Chr10: 46857261-46857760 Glycine max
Glyma.10G239900 1.0kb upstream 1.0kb upstream 3566 true Chr10: 46853695-46857260 Glycine max
Glyma.10G239900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 46853695-46854694 Glycine max
Glyma.10G239900 1.0kb downstream 1.0kb downstream 3566 true Chr10: 46854695-46858260 Glycine max
Glyma.10G239900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 46857261-46858260 Glycine max
Glyma.10G239900 2.0kb upstream 2.0kb upstream 4566 true Chr10: 46852695-46857260 Glycine max
Glyma.10G239900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 46852695-46854694 Glycine max
Glyma.10G239900 2.0kb downstream 2.0kb downstream 4566 true Chr10: 46854695-46859260 Glycine max
Glyma.10G239900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 46857261-46859260 Glycine max
Glyma.10G239900 5.0kb upstream 5.0kb upstream 7566 true Chr10: 46849695-46857260 Glycine max
Glyma.10G239900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 46849695-46854694 Glycine max
Glyma.10G239900 5.0kb downstream 5.0kb downstream 7566 true Chr10: 46854695-46862260 Glycine max
Glyma.10G239900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 46857261-46862260 Glycine max
Glyma.10G239900 10.0kb upstream 10.0kb upstream 12566 true Chr10: 46844695-46857260 Glycine max
Glyma.10G239900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 46844695-46854694 Glycine max
Glyma.10G239900 10.0kb downstream 10.0kb downstream 12566 true Chr10: 46854695-46867260 Glycine max
Glyma.10G239900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 46857261-46867260 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314685 5265 Fabidae View MSA
124069827 5270 Rosid View MSA
123745676 5271 Pentapetalae View MSA
122790060 5272 Eudicot View MSA
122044983 5273 Angiosperm View MSA
121350233 5274 Embryophyte View MSA
123381636 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.63507 0.0 20.5452   High
cufflinks 0.535332 0.0 1.91668    
cufflinks 1.56239 0.0 4.96419    
cufflinks 0.0722326 0.0 0.284434 Low Low
cufflinks 0.46809 0.0 1.69318    
cufflinks 5.76057 0.0 15.7466   High
cufflinks 0.145349 0.0 0.557123 Low Low
cufflinks 0.639117 0.0 2.25262    
cufflinks 0.576087 0.0 2.05125    
cufflinks 0.862        
cufflinks 0.469        
cufflinks 1.29        
cufflinks 0.993        
cufflinks 0.071     Low Low
cufflinks 0.044     Low Low
cufflinks 1.986        
cufflinks 3.024       High
cufflinks 0.49        
cufflinks 0.425        
cufflinks 1.517        
cufflinks 0.355        
cufflinks 2.375       High
cufflinks 1.994        
cufflinks 1.017        
cufflinks 1.172        
cufflinks 0.767        

0 Strain