Gene : Glyma.10G240400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10869:SF80 - IRON ION BINDING / OXIDOREDUCTASE Genomic Order:  2404
Name:  ? Glyma.10G240400 Secondary Identifier:  ? PAC:30475545
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G240400 0.5kb upstream 0.5kb upstream 2612 true Chr10: 46881013-46883624 Glycine max
Glyma.10G240400 0.5kb upstream 0.5kb upstream 500 false Chr10: 46883125-46883624 Glycine max
Glyma.10G240400 0.5kb downstream 0.5kb downstream 2612 true Chr10: 46880513-46883124 Glycine max
Glyma.10G240400 0.5kb downstream 0.5kb downstream 500 false Chr10: 46880513-46881012 Glycine max
Glyma.10G240400 1.0kb upstream 1.0kb upstream 3112 true Chr10: 46881013-46884124 Glycine max
Glyma.10G240400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 46883125-46884124 Glycine max
Glyma.10G240400 1.0kb downstream 1.0kb downstream 3112 true Chr10: 46880013-46883124 Glycine max
Glyma.10G240400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 46880013-46881012 Glycine max
Glyma.10G240400 2.0kb upstream 2.0kb upstream 4112 true Chr10: 46881013-46885124 Glycine max
Glyma.10G240400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 46883125-46885124 Glycine max
Glyma.10G240400 2.0kb downstream 2.0kb downstream 4112 true Chr10: 46879013-46883124 Glycine max
Glyma.10G240400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 46879013-46881012 Glycine max
Glyma.10G240400 5.0kb upstream 5.0kb upstream 7112 true Chr10: 46881013-46888124 Glycine max
Glyma.10G240400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 46883125-46888124 Glycine max
Glyma.10G240400 5.0kb downstream 5.0kb downstream 7112 true Chr10: 46876013-46883124 Glycine max
Glyma.10G240400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 46876013-46881012 Glycine max
Glyma.10G240400 10.0kb upstream 10.0kb upstream 12112 true Chr10: 46881013-46893124 Glycine max
Glyma.10G240400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 46883125-46893124 Glycine max
Glyma.10G240400 10.0kb downstream 10.0kb downstream 12112 true Chr10: 46871013-46883124 Glycine max
Glyma.10G240400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 46871013-46881012 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307653 5265 Fabidae View MSA
124063510 5270 Rosid View MSA
123744389 5271 Pentapetalae View MSA
122789479 5272 Eudicot View MSA
122042956 5273 Angiosperm View MSA
121350444 5274 Embryophyte View MSA
123425265 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.32546 0.0 22.7496   Low
cufflinks 7.02848 0.0 24.6045    
cufflinks 13.5675 0.0 41.6748   High
cufflinks 7.04941 0.0 24.4765    
cufflinks 9.34023 0.0 30.5558    
cufflinks 16.2613 0.0 49.122   High
cufflinks 9.9057 0.0 32.3585    
cufflinks 8.7399 0.0 28.7866    
cufflinks 10.1722 0.0 32.5155    
cufflinks 5.471        
cufflinks 4.865        
cufflinks 6.897        
cufflinks 7.89     High High
cufflinks 10.939     High High
cufflinks 3.957        
cufflinks 3.849        
cufflinks 3.628       Low
cufflinks 7.231       High
cufflinks 4.996        
cufflinks 4.125        
cufflinks 4.45        
cufflinks 4.131        
cufflinks 4.578        
cufflinks 6.273     High  
cufflinks 4.589        
cufflinks 3.926        

0 Strain