Gene : Glyma.10G240600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21726:SF51 - GENOMIC DNA, CHROMOSOME 5, P1 CLONE:MTG10 Genomic Order:  2406
Name:  ? Glyma.10G240600 Secondary Identifier:  ? PAC:30475653
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G240600 0.5kb upstream 0.5kb upstream 4640 true Chr10: 46901670-46906309 Glycine max
Glyma.10G240600 0.5kb upstream 0.5kb upstream 500 false Chr10: 46901670-46902169 Glycine max
Glyma.10G240600 0.5kb downstream 0.5kb downstream 4640 true Chr10: 46902170-46906809 Glycine max
Glyma.10G240600 0.5kb downstream 0.5kb downstream 500 false Chr10: 46906310-46906809 Glycine max
Glyma.10G240600 1.0kb upstream 1.0kb upstream 5140 true Chr10: 46901170-46906309 Glycine max
Glyma.10G240600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 46901170-46902169 Glycine max
Glyma.10G240600 1.0kb downstream 1.0kb downstream 5140 true Chr10: 46902170-46907309 Glycine max
Glyma.10G240600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 46906310-46907309 Glycine max
Glyma.10G240600 2.0kb upstream 2.0kb upstream 6140 true Chr10: 46900170-46906309 Glycine max
Glyma.10G240600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 46900170-46902169 Glycine max
Glyma.10G240600 2.0kb downstream 2.0kb downstream 6140 true Chr10: 46902170-46908309 Glycine max
Glyma.10G240600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 46906310-46908309 Glycine max
Glyma.10G240600 5.0kb upstream 5.0kb upstream 9140 true Chr10: 46897170-46906309 Glycine max
Glyma.10G240600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 46897170-46902169 Glycine max
Glyma.10G240600 5.0kb downstream 5.0kb downstream 9140 true Chr10: 46902170-46911309 Glycine max
Glyma.10G240600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 46906310-46911309 Glycine max
Glyma.10G240600 10.0kb upstream 10.0kb upstream 14140 true Chr10: 46892170-46906309 Glycine max
Glyma.10G240600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 46892170-46902169 Glycine max
Glyma.10G240600 10.0kb downstream 10.0kb downstream 14140 true Chr10: 46902170-46916309 Glycine max
Glyma.10G240600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 46906310-46916309 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314975 5265 Fabidae View MSA
124062054 5270 Rosid View MSA
123749389 5271 Pentapetalae View MSA
122793525 5272 Eudicot View MSA
122045763 5273 Angiosperm View MSA
121310498 5274 Embryophyte View MSA
123347966 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0396026 0.0 0.160296 Low Low
cufflinks 1.76287 0.0 7.57593    
cufflinks 0.52452 0.0 3.02557    
cufflinks 1.74013 0.0 7.20088    
cufflinks 2.74174 0.0 9.82328   High
cufflinks 0.878601 0.0 3.51751    
cufflinks 1.7625 0.0 7.26823    
cufflinks 0.30447 0.0 1.90425    
cufflinks 0.850509 0.0 4.35536    
cufflinks 0.126        
cufflinks 0.028     Low  
cufflinks 0.629       High
cufflinks 1.342       High
cufflinks 1.937       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.04     Low  
cufflinks 0.063     Low  
cufflinks 0.744       High
cufflinks 1.044       High
cufflinks 0.009     Low Low
cufflinks 0.042     Low  
cufflinks 0.007     Low Low
cufflinks 0.002     Low Low
cufflinks 0.023     Low  
cufflinks 0.014     Low  
cufflinks 0.102        

0 Strain