Gene : Glyma.10G230500 G. max Wm82.a2.v1
Defline:  (1 of 17) PTHR22814:SF129 - COPPER TRANSPORT FAMILY PROTEIN-RELATED Genomic Order:  2305
Name:  ? Glyma.10G230500 Secondary Identifier:  ? PAC:30477568
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G230500 0.5kb upstream 0.5kb upstream 1597 true Chr10: 46044438-46046034 Glycine max
Glyma.10G230500 0.5kb upstream 0.5kb upstream 500 false Chr10: 46045535-46046034 Glycine max
Glyma.10G230500 0.5kb downstream 0.5kb downstream 1597 true Chr10: 46043938-46045534 Glycine max
Glyma.10G230500 0.5kb downstream 0.5kb downstream 500 false Chr10: 46043938-46044437 Glycine max
Glyma.10G230500 1.0kb upstream 1.0kb upstream 2097 true Chr10: 46044438-46046534 Glycine max
Glyma.10G230500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 46045535-46046534 Glycine max
Glyma.10G230500 1.0kb downstream 1.0kb downstream 2097 true Chr10: 46043438-46045534 Glycine max
Glyma.10G230500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 46043438-46044437 Glycine max
Glyma.10G230500 2.0kb upstream 2.0kb upstream 3097 true Chr10: 46044438-46047534 Glycine max
Glyma.10G230500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 46045535-46047534 Glycine max
Glyma.10G230500 2.0kb downstream 2.0kb downstream 3097 true Chr10: 46042438-46045534 Glycine max
Glyma.10G230500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 46042438-46044437 Glycine max
Glyma.10G230500 5.0kb upstream 5.0kb upstream 6097 true Chr10: 46044438-46050534 Glycine max
Glyma.10G230500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 46045535-46050534 Glycine max
Glyma.10G230500 5.0kb downstream 5.0kb downstream 6097 true Chr10: 46039438-46045534 Glycine max
Glyma.10G230500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 46039438-46044437 Glycine max
Glyma.10G230500 10.0kb upstream 10.0kb upstream 11097 true Chr10: 46044438-46055534 Glycine max
Glyma.10G230500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 46045535-46055534 Glycine max
Glyma.10G230500 10.0kb downstream 10.0kb downstream 11097 true Chr10: 46034438-46045534 Glycine max
Glyma.10G230500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 46034438-46044437 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298097 5265 Fabidae View MSA
124072200 5270 Rosid View MSA
123751300 5271 Pentapetalae View MSA
122793053 5272 Eudicot View MSA
122051560 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0644028 0.0 0.274452 Low  
cufflinks 0.0310984 0.0 0.141032 Low Low
cufflinks 0.115141 0.0 0.470266 Low  
cufflinks 0.0847874 0.0 0.353176 Low  
cufflinks 1.4621 0.0 5.3692    
cufflinks 4.78194 0.0 15.9068   High
cufflinks 0.114793 0.0 0.470889 Low  
cufflinks 0.0924752 0.0 0.382962 Low  
cufflinks 2.63093 0.0 9.29009   High
cufflinks 0.287        
cufflinks 1.695        
cufflinks 0.155        
cufflinks 7.588     High High
cufflinks 6.731     High High
cufflinks 1.692        
cufflinks 0.179        
cufflinks 2.191        
cufflinks 0.247        
cufflinks 0.059     Low Low
cufflinks 0.066     Low Low
cufflinks 2.031        
cufflinks 0.173        
cufflinks 0.117        
cufflinks 1.302        
cufflinks 0.082     Low Low
cufflinks 3.565       High

0 Strain