Gene : Glyma.10G232000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31636:SF4 - SCARECROW-LIKE PROTEIN 8 Genomic Order:  2320
Name:  ? Glyma.10G232000 Secondary Identifier:  ? PAC:30474590
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G232000 0.5kb upstream 0.5kb upstream 3090 true Chr10: 46153799-46156888 Glycine max
Glyma.10G232000 0.5kb upstream 0.5kb upstream 500 false Chr10: 46153799-46154298 Glycine max
Glyma.10G232000 0.5kb downstream 0.5kb downstream 3090 true Chr10: 46154299-46157388 Glycine max
Glyma.10G232000 0.5kb downstream 0.5kb downstream 500 false Chr10: 46156889-46157388 Glycine max
Glyma.10G232000 1.0kb upstream 1.0kb upstream 3590 true Chr10: 46153299-46156888 Glycine max
Glyma.10G232000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 46153299-46154298 Glycine max
Glyma.10G232000 1.0kb downstream 1.0kb downstream 3590 true Chr10: 46154299-46157888 Glycine max
Glyma.10G232000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 46156889-46157888 Glycine max
Glyma.10G232000 2.0kb upstream 2.0kb upstream 4590 true Chr10: 46152299-46156888 Glycine max
Glyma.10G232000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 46152299-46154298 Glycine max
Glyma.10G232000 2.0kb downstream 2.0kb downstream 4590 true Chr10: 46154299-46158888 Glycine max
Glyma.10G232000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 46156889-46158888 Glycine max
Glyma.10G232000 5.0kb upstream 5.0kb upstream 7590 true Chr10: 46149299-46156888 Glycine max
Glyma.10G232000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 46149299-46154298 Glycine max
Glyma.10G232000 5.0kb downstream 5.0kb downstream 7590 true Chr10: 46154299-46161888 Glycine max
Glyma.10G232000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 46156889-46161888 Glycine max
Glyma.10G232000 10.0kb upstream 10.0kb upstream 12590 true Chr10: 46144299-46156888 Glycine max
Glyma.10G232000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 46144299-46154298 Glycine max
Glyma.10G232000 10.0kb downstream 10.0kb downstream 12590 true Chr10: 46154299-46166888 Glycine max
Glyma.10G232000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 46156889-46166888 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253858 5265 Fabidae View MSA
124062619 5270 Rosid View MSA
123752771 5271 Pentapetalae View MSA
122794202 5272 Eudicot View MSA
122051595 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.44061 0.0 9.97608    
cufflinks 1.35296 0.0 4.48725   Low
cufflinks 13.7488 0.0 36.6801   High
cufflinks 4.58386 0.0 12.9095    
cufflinks 3.41113 0.0 9.83138    
cufflinks 2.18644 0.0 6.73492    
cufflinks 2.63417 0.0 7.8891    
cufflinks 2.82713 0.0 8.4542    
cufflinks 3.65898 0.0 10.5327    
cufflinks 0.813        
cufflinks 4.298        
cufflinks 9.786     High High
cufflinks 1.487        
cufflinks 0.95        
cufflinks 2.505        
cufflinks 0.952        
cufflinks 6.208     High High
cufflinks 6.557       High
cufflinks 1.278        
cufflinks 0.718       Low
cufflinks 1.981        
cufflinks 0.977        
cufflinks 0.592       Low
cufflinks 5.053       High
cufflinks 0.71       Low
cufflinks 3.923        

0 Strain